RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 TBC1D20Q96BZ9 403 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 ZNF578Q96N58 590 aaPredicted RBP7.77□□□□□ -1.16
VPS36-201ENST00000378060 GDF15Q99988 308 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 NICN1Q9BSH3 213 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 MED20Q9H944 212 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 PRDM9Q9NQV7 894 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 PLEKHJ1Q9NW61 149 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 ZNF226Q9NYT6 803 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 KLHL13Q9P2N7 655 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 CPNE7Q9UBL6 633 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 LSM5Q9Y4Y9 91 aaKnown RBP7.77□□□□□ -1.16
VPS36-201ENST00000378060 CORINQ9Y5Q5 1042 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 PIAS3Q9Y6X2 628 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 A0A1B0GWA3 101 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 TMEM72A0PK05 275 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 SLC22A23A1A5C7 686 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 TNFRSF10AO00220 468 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 LCMT2O60294 686 aaKnown RBP7.77□□□□□ -1.17
VPS36-201ENST00000378060 RAD1O60671 282 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 HTR3BO95264 441 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 CAV2P51636 162 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 SORDQ00796 357 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 BTN1A1Q13410 526 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 Q6ZSR6 202 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 USP53Q70EK8 1073 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 SULF2Q8IWU5 870 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 GIMAP5Q96F15 307 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 PBX4Q9BYU1 374 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 QRSL1Q9H0R6 528 aaKnown RBP7.77□□□□□ -1.17
VPS36-201ENST00000378060 IKZF5Q9H5V7 419 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 TMEM30AQ9NV96 361 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 RLIMQ9NVW2 624 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 COPS3Q9UNS2 423 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 TRBV5-4A0A0C4DH59 114 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 GGT3PA6NGU5 568 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 DVL2O14641 736 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 CD14P08571 375 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 HMGA1P17096 107 aaKnown RBP7.77□□□□□ -1.17
VPS36-201ENST00000378060 SELENOVP59797 346 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 YPEL5P62699 121 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 BDH1Q02338 343 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 HTR4Q13639 388 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 TPBGQ13641 420 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 FAM69BQ5VUD6 431 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 ALKAL2Q6UX46 152 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 TMPPEQ6ZT21 453 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 CMIPQ8IY22 773 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 TCEAL3Q969E4 200 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 PRSS16Q9NQE7 514 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 MUTYHQ9UIF7 546 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 KCNS2Q9ULS6 477 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 NUMBLQ9Y6R0 609 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 USP34Q70CQ2 3546 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 MN1Q10571 1320 aaPredicted RBP7.77□□□□□ -1.17
VPS36-201ENST00000378060 A0A087WUU8 490 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 TSPAN11A1L157 253 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 LINC01553A4QN01 128 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 EPOPA6NHQ4 379 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 NUPL2O15504 423 aaKnown RBP7.77□□□□□ -1.17
VPS36-201ENST00000378060 GALR3O60755 368 aaPredicted RBP7.77□□□□□ -1.17
VPS36-201ENST00000378060 IFNGR1P15260 489 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 TAS2R46P59540 309 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 MPEG1Q2M385 716 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 AADACL4Q5VUY2 407 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 OR7E24Q6IFN5 339 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 IDO2Q6ZQW0 420 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 FAM160A2Q8N612 972 aaPredicted RBP7.77□□□□□ -1.17
VPS36-201ENST00000378060 TSPAN10Q9H1Z9 355 aaPredicted RBP7.77□□□□□ -1.17
VPS36-201ENST00000378060 NOX4Q9NPH5 578 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 DUSP22Q9NRW4 184 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 LUZP4Q9P127 313 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 TMPRSS11EQ9UL52 423 aa7.77□□□□□ -1.17
VPS36-201ENST00000378060 MEIS3P1A6NDR6 274 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 SERINC4A6NH21 518 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 PAPLNO95428 1278 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 BPNT1O95861 308 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 SBK2P0C263 348 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 AQP6Q13520 282 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 TMEM52BQ4KMG9 183 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 MANEAQ5SRI9 462 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 NIPAL3Q6P499 406 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 CYHR1Q6ZMK1 362 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 OVCH1Q7RTY7 1134 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 CD163Q86VB7 1156 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 ZNF695Q8IW36 515 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 ARRDC3Q96B67 414 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 LRFN5Q96NI6 719 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 TMEM43Q9BTV4 400 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 ST6GALNAC5Q9BVH7 336 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 HDAC8Q9BY41 377 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 LDAHQ9H6V9 325 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 WDR76Q9H967 626 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 NTN4Q9HB63 628 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 BCL2L10Q9HD36 194 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 RPS10P5Q9NQ39 176 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 KCNIP1Q9NZI2 227 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 TAAR2Q9P1P5 351 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.76□□□□□ -1.17
VPS36-201ENST00000378060 ATG4BQ9Y4P1 393 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 ASB1Q9Y576 335 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms