RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 NUDT22Q9BRQ3 303 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 SORBS2O94875 1100 aaKnown RBP10.87□□□□□ -0.67
VPS13A-205ENST00000376636 SLC36A2Q495M3 483 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 CNEP1R1Q8N9A8 125 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 KAZALD1Q96I82 304 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 PLEKHF2Q9H8W4 249 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 GORASP2Q9H8Y8 452 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 SLAMF7Q9NQ25 335 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 NRIP3Q9NQ35 241 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 HEYLQ9NQ87 328 aaPredicted RBP10.87□□□□□ -0.67
VPS13A-205ENST00000376636 INSL5Q9Y5Q6 135 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 OR5K3A6NET4 321 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 OR8G2PQ6IF36 304 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 FCRLAQ7L513 359 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 SDR9C7Q8NEX9 313 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 OR2G3Q8NGZ4 309 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 APH1BQ8WW43 257 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 RIMS4Q9H426 269 aaPredicted RBP10.86□□□□□ -0.67
VPS13A-205ENST00000376636 GIMAP2Q9UG22 337 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 BTNL2Q9UIR0 455 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 FBXL2Q9UKC9 423 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 MEGF6O75095 1541 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 LGALS4P56470 323 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 WDR5P61964 334 aaKnown RBP10.86□□□□□ -0.67
VPS13A-205ENST00000376636 ZNF91Q05481 1191 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 PDZD11Q5EBL8 140 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 HMGN2P46Q86SG4 172 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 C7orf43Q8WVR3 580 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 PIGQQ9BRB3 760 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 TARBP1Q13395 1621 aaKnown RBP10.86□□□□□ -0.67
VPS13A-205ENST00000376636 TEX50A0A1B0GTY4 177 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 RABGGTBP53611 331 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 ASB13Q8WXK3 278 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 AKR1E2Q96JD6 320 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 VAPAQ9P0L0 249 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 OSGIN1Q9UJX0 560 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 OR52A1Q9UKL2 312 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 FZD1Q9UP38 647 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 C17orf105B2RV13 164 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 NRP1O14786 923 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 DUSP1P28562 367 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 TPPP2P59282 170 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 RTL8BQ17RB0 113 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 FAM103A1Q9BTL3 118 aaKnown RBP10.86□□□□□ -0.67
VPS13A-205ENST00000376636 MMP7P09237 267 aaPredicted RBP10.86□□□□□ -0.67
VPS13A-205ENST00000376636 CASP3P42574 277 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 ZNF90Q03938 601 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 SLC14A2Q15849 920 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 MUTYHQ9UIF7 546 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 ZFC3H1O60293 1989 aaKnown RBP10.86□□□□□ -0.67
VPS13A-205ENST00000376636 LGALS8O00214 317 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 SLC16A7O60669 478 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 SLC35E2BP0CK96 405 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 SLC38A6Q8IZM9 456 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 TMEM130Q8N3G9 435 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 SLC35E1Q96K37 410 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 SLC11A1P49279 550 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 ZNF154Q13106 437 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 OR4F5Q8NH21 305 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 OR4F4Q96R69 305 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 FAM171A2A8MVW0 826 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 F7P08709 466 aaPredicted RBP10.86□□□□□ -0.67
VPS13A-205ENST00000376636 SMPD1P17405 629 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 OPRD1P41143 372 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 HTR4Q13639 388 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 TMEM183BQ1AE95 376 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 MOB3CQ70IA8 216 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 TFAP2CQ92754 450 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 ZNF566Q969W8 418 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 GNPNAT1Q96EK6 184 aaPredicted RBP10.86□□□□□ -0.67
VPS13A-205ENST00000376636 ZNF597Q96LX8 424 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 CTDSP1Q9GZU7 261 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 SULT1C4O75897 302 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 G0S2P27469 103 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 MEOX1P50221 254 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 GATMP50440 423 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 PIN1Q13526 163 aaPredicted RBP10.86□□□□□ -0.67
VPS13A-205ENST00000376636 SYT6Q5T7P8 510 aaPredicted RBP10.86□□□□□ -0.67
VPS13A-205ENST00000376636 WDR88Q6ZMY6 472 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 SLC22A24Q8N4F4 322 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 CPEB3Q8NE35 698 aaKnown RBP10.86□□□□□ -0.67
VPS13A-205ENST00000376636 SHARPINQ9H0F6 387 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 MED9Q9NWA0 146 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 WNT6Q9Y6F9 365 aa10.86□□□□□ -0.67
VPS13A-205ENST00000376636 DICER1Q9UPY3 1922 aaKnown RBP10.85□□□□□ -0.67
VPS13A-205ENST00000376636 RAD1O60671 282 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 MTHFD2P13995 350 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 CCKARP32238 428 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 HMGCLP35914 325 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 CPXM2Q8N436 756 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 BOKQ9UMX3 212 aaPredicted RBP10.85□□□□□ -0.67
VPS13A-205ENST00000376636 ZNF732B4DXR9 585 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 HSPB6O14558 160 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 TEAD2Q15562 447 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 ZNF626Q68DY1 528 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 PRSS35Q8N3Z0 413 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 ASB11Q8WXH4 323 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 ZNF300Q96RE9 604 aaPredicted RBP10.85□□□□□ -0.67
VPS13A-205ENST00000376636 VN1R3Q9BXE9 311 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 LEFTY2O00292 366 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms