RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 MEPEQ9NQ76 525 aaPredicted RBP13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 OR2S2Q9NQN1 319 aa13.22□□□□□ -0.29
TNFRSF1B-201ENST00000376259 A0A1W2PPL8 197 aa13.21□□□□□ -0.29
TNFRSF1B-201ENST00000376259 AMY2AP04746 511 aa13.21□□□□□ -0.29
TNFRSF1B-201ENST00000376259 ANKRD34CP0C6C1 535 aa13.21□□□□□ -0.29
TNFRSF1B-201ENST00000376259 TRAPPC2P0DI81 140 aa13.21□□□□□ -0.29
TNFRSF1B-201ENST00000376259 TRAPPC2BP0DI82 140 aa13.21□□□□□ -0.29
TNFRSF1B-201ENST00000376259 ARFIP1P53367 373 aa13.21□□□□□ -0.29
TNFRSF1B-201ENST00000376259 EOGTQ5NDL2 527 aa13.21□□□□□ -0.29
TNFRSF1B-201ENST00000376259 ZNF248Q8NDW4 579 aa13.21□□□□□ -0.29
TNFRSF1B-201ENST00000376259 NR4A3Q92570 626 aa13.21□□□□□ -0.29
TNFRSF1B-201ENST00000376259 ZNF707Q96C28 371 aaPredicted RBP13.21□□□□□ -0.29
TNFRSF1B-201ENST00000376259 ARHGDIGQ99819 225 aa13.21□□□□□ -0.29
TNFRSF1B-201ENST00000376259 TIMM29Q9BSF4 260 aa13.21□□□□□ -0.29
TNFRSF1B-201ENST00000376259 CCSO14618 274 aa13.21□□□□□ -0.29
TNFRSF1B-201ENST00000376259 RAF1P04049 648 aa13.21□□□□□ -0.29
TNFRSF1B-201ENST00000376259 CD2P06729 351 aa13.21□□□□□ -0.29
TNFRSF1B-201ENST00000376259 ZNF35P13682 527 aa13.21□□□□□ -0.29
TNFRSF1B-201ENST00000376259 CDK2P24941 298 aa13.21□□□□□ -0.29
TNFRSF1B-201ENST00000376259 NUP62P37198 522 aaPredicted RBP13.21□□□□□ -0.29
TNFRSF1B-201ENST00000376259 SFRP5Q5T4F7 317 aa13.21□□□□□ -0.29
TNFRSF1B-201ENST00000376259 FAM180AQ6UWF9 173 aa13.21□□□□□ -0.29
TNFRSF1B-201ENST00000376259 ZNF550Q7Z398 422 aa13.21□□□□□ -0.29
TNFRSF1B-201ENST00000376259 APOBEC4Q8WW27 367 aaKnown RBP13.21□□□□□ -0.29
TNFRSF1B-201ENST00000376259 MED18Q9BUE0 208 aa13.21□□□□□ -0.29
TNFRSF1B-201ENST00000376259 MED17Q9NVC6 651 aa13.21□□□□□ -0.29
TNFRSF1B-201ENST00000376259 TSPAN11A1L157 253 aa13.21□□□□□ -0.3
TNFRSF1B-201ENST00000376259 RP2O75695 350 aa13.21□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ATP1B1P05026 303 aa13.21□□□□□ -0.3
TNFRSF1B-201ENST00000376259 PEBP1P30086 187 aaKnown RBP13.21□□□□□ -0.3
TNFRSF1B-201ENST00000376259 SLC6A1P30531 599 aa13.21□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ADPRHP54922 357 aa13.21□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ULK3Q6PHR2 472 aa13.21□□□□□ -0.3
TNFRSF1B-201ENST00000376259 Q6ZTK2 550 aa13.21□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ZPLD1Q8TCW7 415 aa13.21□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ADAMTS14Q8WXS8 1223 aa13.21□□□□□ -0.3
TNFRSF1B-201ENST00000376259 MS4A3Q96HJ5 214 aa13.21□□□□□ -0.3
TNFRSF1B-201ENST00000376259 HDAC8Q9BY41 377 aa13.21□□□□□ -0.3
TNFRSF1B-201ENST00000376259 NRIP3Q9NQ35 241 aa13.21□□□□□ -0.3
TNFRSF1B-201ENST00000376259 CGGBP1Q9UFW8 167 aaPredicted RBP13.21□□□□□ -0.3
TNFRSF1B-201ENST00000376259 A0A087WV48 116 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 FITM1A5D6W6 292 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 CTSBP07858 339 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 CELA2BP08218 269 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ST6GAL1P15907 406 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ARRB1P49407 418 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 LTBQ06643 244 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 TOMM20Q15388 145 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ZBTB37Q5TC79 503 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 TEX261Q6UWH6 196 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ZNF101Q8IZC7 436 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 SDR16C5Q8N3Y7 309 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 RCBTB1Q8NDN9 531 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 LMX1AQ8TE12 382 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 PTDSS2Q9BVG9 487 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ACAD8Q9UKU7 415 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 U3KQ87 197 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 SLC16A7O60669 478 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 TNFP01375 233 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 RNH1P13489 461 aaKnown RBP13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ZNF823P16415 610 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ENDOUP21128 410 aaKnown RBP13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 PRKXP51817 358 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 CAMK2BQ13554 666 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ARHGAP11BQ3KRB8 267 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 FAM74A1Q5RGS3 127 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 RPL13AP3Q6NVV1 102 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 FAM198BQ6UWH4 519 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ETFBKMTQ8IXQ9 262 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 SLC37A2Q8TED4 501 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ZNF436Q9C0F3 470 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 TAS2R3Q9NYW6 316 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 DHCR7Q9UBM7 475 aaKnown RBP13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 MAFFQ9ULX9 164 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 TRIOBPQ9H2D6 2365 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 CHD7Q9P2D1 2997 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 NR0B1P51843 470 aaKnown RBP13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 LINC00303Q3SY05 128 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 GARNL3Q5VVW2 1013 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 YIPF5Q969M3 257 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 COX14Q96I36 57 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 DPYSL5Q9BPU6 564 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 KIR3DX1Q9H7L2 352 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ADGRL4Q9HBW9 690 aa13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 C19orf53Q9UNZ5 99 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF1B-201ENST00000376259 TMIGD3P0DMS9 266 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF1B-201ENST00000376259 AKR1C4P17516 323 aa13.19□□□□□ -0.3
TNFRSF1B-201ENST00000376259 PBX2P40425 430 aa13.19□□□□□ -0.3
TNFRSF1B-201ENST00000376259 GPR143P51810 404 aa13.19□□□□□ -0.3
TNFRSF1B-201ENST00000376259 PRMT2P55345 433 aa13.19□□□□□ -0.3
TNFRSF1B-201ENST00000376259 PER3P56645 1201 aa13.19□□□□□ -0.3
TNFRSF1B-201ENST00000376259 FOXL2P58012 376 aa13.19□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ZNF85Q03923 595 aa13.19□□□□□ -0.3
TNFRSF1B-201ENST00000376259 CDK5R1Q15078 307 aa13.19□□□□□ -0.3
TNFRSF1B-201ENST00000376259 C19orf48Q6RUI8 117 aa13.19□□□□□ -0.3
TNFRSF1B-201ENST00000376259 CFAP77Q6ZQR2 320 aa13.19□□□□□ -0.3
TNFRSF1B-201ENST00000376259 FAM160A2Q8N612 972 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF1B-201ENST00000376259 OR5M1Q8NGP8 315 aa13.19□□□□□ -0.3
TNFRSF1B-201ENST00000376259 PPP1R14AQ96A00 147 aa13.19□□□□□ -0.3
TNFRSF1B-201ENST00000376259 HHIPL1Q96JK4 782 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms