RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 HPRP00739 348 aa13.68□□□□□ -0.22
SDHB-201ENST00000375499 BGLAPP02818 100 aa13.68□□□□□ -0.22
SDHB-201ENST00000375499 CD3EP07766 207 aa13.68□□□□□ -0.22
SDHB-201ENST00000375499 SOD3P08294 240 aa13.68□□□□□ -0.22
SDHB-201ENST00000375499 COQ5Q5HYK3 327 aa13.68□□□□□ -0.22
SDHB-201ENST00000375499 Q5PR19 223 aa13.68□□□□□ -0.22
SDHB-201ENST00000375499 FAM69AQ5T7M9 428 aa13.68□□□□□ -0.22
SDHB-201ENST00000375499 FAM91A1Q658Y4 838 aa13.68□□□□□ -0.22
SDHB-201ENST00000375499 TMEM225Q6GV28 225 aa13.68□□□□□ -0.22
SDHB-201ENST00000375499 ULK3Q6PHR2 472 aa13.68□□□□□ -0.22
SDHB-201ENST00000375499 WDFY1Q8IWB7 410 aa13.68□□□□□ -0.22
SDHB-201ENST00000375499 ZNF611Q8N823 705 aa13.68□□□□□ -0.22
SDHB-201ENST00000375499 BHLHE22Q8NFJ8 381 aaPredicted RBP13.68□□□□□ -0.22
SDHB-201ENST00000375499 OR8J3Q8NGG0 315 aa13.68□□□□□ -0.22
SDHB-201ENST00000375499 VANGL1Q8TAA9 524 aaPredicted RBP13.68□□□□□ -0.22
SDHB-201ENST00000375499 RNF217Q8TC41 542 aa13.68□□□□□ -0.22
SDHB-201ENST00000375499 MUS81Q96NY9 551 aa13.68□□□□□ -0.22
SDHB-201ENST00000375499 MOGAT1Q96PD6 335 aa13.68□□□□□ -0.22
SDHB-201ENST00000375499 MCHR1Q99705 422 aa13.68□□□□□ -0.22
SDHB-201ENST00000375499 ESRP2Q9H6T0 727 aaKnown RBP13.68□□□□□ -0.22
SDHB-201ENST00000375499 SLC13A4Q9UKG4 626 aa13.68□□□□□ -0.22
SDHB-201ENST00000375499 RASD1Q9Y272 281 aa13.68□□□□□ -0.22
SDHB-201ENST00000375499 CAPN7Q9Y6W3 813 aa13.68□□□□□ -0.22
SDHB-201ENST00000375499 HEATR1Q9H583 2144 aaKnown RBP13.67□□□□□ -0.22
SDHB-201ENST00000375499 TRAV36DV7A0A075B6V5 113 aa13.67□□□□□ -0.22
SDHB-201ENST00000375499 CPSF4LA6NMK7 179 aaKnown RBP13.67□□□□□ -0.22
SDHB-201ENST00000375499 BBIP1A8MTZ0 92 aa13.67□□□□□ -0.22
SDHB-201ENST00000375499 KIAA1324LA8MWY0 1029 aaPredicted RBP13.67□□□□□ -0.22
SDHB-201ENST00000375499 TRAF3IP2O43734 574 aaPredicted RBP13.67□□□□□ -0.22
SDHB-201ENST00000375499 UPK3AO75631 287 aa13.67□□□□□ -0.22
SDHB-201ENST00000375499 ZNF432O94892 652 aa13.67□□□□□ -0.22
SDHB-201ENST00000375499 DANCRP0C864 163 aa13.67□□□□□ -0.22
SDHB-201ENST00000375499 TNFRSF1BP20333 461 aa13.67□□□□□ -0.22
SDHB-201ENST00000375499 MPGP29372 298 aa13.67□□□□□ -0.22
SDHB-201ENST00000375499 ZNF83P51522 516 aa13.67□□□□□ -0.22
SDHB-201ENST00000375499 PPP2R2BQ00005 443 aa13.67□□□□□ -0.22
SDHB-201ENST00000375499 CYLC2Q14093 348 aaPredicted RBP13.67□□□□□ -0.22
SDHB-201ENST00000375499 MMEL1Q495T6 779 aa13.67□□□□□ -0.22
SDHB-201ENST00000375499 ZNF672Q499Z4 452 aaPredicted RBP13.67□□□□□ -0.22
SDHB-201ENST00000375499 NIPAL3Q6P499 406 aa13.67□□□□□ -0.22
SDHB-201ENST00000375499 CCDC80Q76M96 950 aa13.67□□□□□ -0.22
SDHB-201ENST00000375499 RANBP3LQ86VV4 465 aaPredicted RBP13.67□□□□□ -0.22
SDHB-201ENST00000375499 NANOS1Q8WY41 292 aaKnown RBP13.67□□□□□ -0.22
SDHB-201ENST00000375499 RCN3Q96D15 328 aa13.67□□□□□ -0.22
SDHB-201ENST00000375499 MUCL1Q96DR8 90 aa13.67□□□□□ -0.22
SDHB-201ENST00000375499 SLC47A1Q96FL8 570 aa13.67□□□□□ -0.22
SDHB-201ENST00000375499 ZNF583Q96ND8 569 aa13.67□□□□□ -0.22
SDHB-201ENST00000375499 USB1Q9BQ65 265 aaKnown RBP13.67□□□□□ -0.22
SDHB-201ENST00000375499 C1QTNF6Q9BXI9 259 aa13.67□□□□□ -0.22
SDHB-201ENST00000375499 TMEM27Q9HBJ8 222 aa13.67□□□□□ -0.22
SDHB-201ENST00000375499 NGBQ9NPG2 151 aa13.67□□□□□ -0.22
SDHB-201ENST00000375499 PARPBPQ9NWS1 579 aa13.67□□□□□ -0.22
SDHB-201ENST00000375499 ABCD4O14678 606 aa13.66□□□□□ -0.22
SDHB-201ENST00000375499 AIM2O14862 343 aa13.66□□□□□ -0.22
SDHB-201ENST00000375499 VAMP5O95183 116 aa13.66□□□□□ -0.22
SDHB-201ENST00000375499 HLA-DOBP13765 273 aa13.66□□□□□ -0.22
SDHB-201ENST00000375499 CDH2P19022 906 aaPredicted RBP13.66□□□□□ -0.22
SDHB-201ENST00000375499 GTF2E2P29084 291 aaKnown RBP13.66□□□□□ -0.22
SDHB-201ENST00000375499 PTH2RP49190 550 aa13.66□□□□□ -0.22
SDHB-201ENST00000375499 CLDN17P56750 224 aa13.66□□□□□ -0.22
SDHB-201ENST00000375499 PGGHGQ32M88 737 aa13.66□□□□□ -0.22
SDHB-201ENST00000375499 HIKESHIQ53FT3 197 aa13.66□□□□□ -0.22
SDHB-201ENST00000375499 ENTPD8Q5MY95 495 aa13.66□□□□□ -0.22
SDHB-201ENST00000375499 LINC00114Q6XXX2 140 aa13.66□□□□□ -0.22
SDHB-201ENST00000375499 B3GLCTQ6Y288 498 aa13.66□□□□□ -0.22
SDHB-201ENST00000375499 PATL1Q86TB9 770 aaKnown RBP13.66□□□□□ -0.22
SDHB-201ENST00000375499 P2RY8Q86VZ1 359 aa13.66□□□□□ -0.22
SDHB-201ENST00000375499 TREML1Q86YW5 311 aa13.66□□□□□ -0.22
SDHB-201ENST00000375499 ADAMTS16Q8TE57 1224 aa13.66□□□□□ -0.22
SDHB-201ENST00000375499 FBXW5Q969U6 566 aa13.66□□□□□ -0.22
SDHB-201ENST00000375499 SLC41A3Q96GZ6 507 aa13.66□□□□□ -0.22
SDHB-201ENST00000375499 NELFAQ9H3P2 528 aa13.66□□□□□ -0.22
SDHB-201ENST00000375499 SLC17A5Q9NRA2 495 aa13.66□□□□□ -0.22
SDHB-201ENST00000375499 LAMP3Q9UQV4 416 aa13.66□□□□□ -0.22
SDHB-201ENST00000375499 MAGED1Q9Y5V3 778 aaPredicted RBP13.66□□□□□ -0.22
SDHB-201ENST00000375499 TLN2Q9Y4G6 2542 aa13.65□□□□□ -0.22
SDHB-201ENST00000375499 MS4A18H0YCH9 400 aa13.65□□□□□ -0.22
SDHB-201ENST00000375499 CHP2O43745 196 aa13.65□□□□□ -0.22
SDHB-201ENST00000375499 FMO6PO60774 539 aa13.65□□□□□ -0.22
SDHB-201ENST00000375499 SHOX2O60902 331 aaPredicted RBP13.65□□□□□ -0.22
SDHB-201ENST00000375499 C8BP07358 591 aa13.65□□□□□ -0.22
SDHB-201ENST00000375499 CDH11P55287 796 aa13.65□□□□□ -0.22
SDHB-201ENST00000375499 MAPRE2Q15555 327 aa13.65□□□□□ -0.22
SDHB-201ENST00000375499 MS4A18Q3C1V0 323 aa13.65□□□□□ -0.22
SDHB-201ENST00000375499 ZNF613Q6PF04 617 aa13.65□□□□□ -0.22
SDHB-201ENST00000375499 C5orf46Q6UWT4 87 aa13.65□□□□□ -0.22
SDHB-201ENST00000375499 SLC30A8Q8IWU4 369 aa13.65□□□□□ -0.22
SDHB-201ENST00000375499 CIARTQ8N365 385 aaPredicted RBP13.65□□□□□ -0.22
SDHB-201ENST00000375499 POMGNT2Q8NAT1 580 aa13.65□□□□□ -0.22
SDHB-201ENST00000375499 C1orf162Q8NEQ5 155 aaPredicted RBP13.65□□□□□ -0.22
SDHB-201ENST00000375499 OXGR1Q96P68 337 aa13.65□□□□□ -0.22
SDHB-201ENST00000375499 ECSITQ9BQ95 431 aa13.65□□□□□ -0.22
SDHB-201ENST00000375499 GSX2Q9BZM3 304 aa13.65□□□□□ -0.22
SDHB-201ENST00000375499 CMTM6Q9NX76 183 aa13.65□□□□□ -0.22
SDHB-201ENST00000375499 FAM220BPB1ANY3 271 aa13.64□□□□□ -0.23
SDHB-201ENST00000375499 M0R1B8 84 aa13.64□□□□□ -0.23
SDHB-201ENST00000375499 OR2T1O43869 369 aa13.64□□□□□ -0.23
SDHB-201ENST00000375499 ZNF43P17038 809 aa13.64□□□□□ -0.23
SDHB-201ENST00000375499 CD40P25942 277 aa13.64□□□□□ -0.23
SDHB-201ENST00000375499 SEC24CP53992 1094 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms