RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 ENDOGQ14249 297 aaKnown RBP9.47□□□□□ -0.89
PTCH1-204ENST00000375290 PLPP4Q5VZY2 271 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 ARRDC1Q8N5I2 433 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 OR4Q3Q8NH05 313 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 UCN3Q969E3 161 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 EGLN3Q9H6Z9 239 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 LSM5Q9Y4Y9 91 aaKnown RBP9.47□□□□□ -0.89
PTCH1-204ENST00000375290 FZD9O00144 591 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 ST8SIA3O43173 380 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 PTPRCAPQ14761 206 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 BRICD5Q6PL45 260 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 SGK3Q96BR1 496 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 MMABQ96EY8 250 aaPredicted RBP9.47□□□□□ -0.89
PTCH1-204ENST00000375290 SAT2Q96F10 170 aaPredicted RBP9.47□□□□□ -0.89
PTCH1-204ENST00000375290 PAPOLGQ9BWT3 736 aaKnown RBP9.47□□□□□ -0.89
PTCH1-204ENST00000375290 OR8D2Q9GZM6 311 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 NECAP2Q9NVZ3 263 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 NSG2Q9Y328 171 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 NRAPQ86VF7 1730 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 ZNF705GA8MUZ8 300 aaPredicted RBP9.47□□□□□ -0.89
PTCH1-204ENST00000375290 GLCEO94923 617 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 IL10RAQ13651 578 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 CTSL3PQ5NE16 218 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 PRAMEF19Q5SWL8 479 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 FAM217AQ8IXS0 508 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 KCNJ15Q99712 375 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 SLIRPQ9GZT3 109 aaKnown RBP9.47□□□□□ -0.89
PTCH1-204ENST00000375290 TMPRSS5Q9H3S3 457 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 KCNS2Q9ULS6 477 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 PSMB6P28072 239 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 EIF1P41567 113 aaKnown RBP9.47□□□□□ -0.89
PTCH1-204ENST00000375290 CD300LDQ6UXZ3 194 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 ZNF852Q6ZMS4 543 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 ZFP41Q8N8Y5 198 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 METTL9Q9H1A3 318 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 C1orf198Q9H425 327 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 WTIPA6NIX2 430 aaPredicted RBP9.47□□□□□ -0.89
PTCH1-204ENST00000375290 SCAMP1O15126 338 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 GALR3O60755 368 aaPredicted RBP9.47□□□□□ -0.89
PTCH1-204ENST00000375290 ADAMTS4O75173 837 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 GPR75O95800 540 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 KNG1P01042 644 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 ITGB2P05107 769 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 SSTR4P31391 388 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 EMG1Q92979 244 aaKnown RBP9.47□□□□□ -0.89
PTCH1-204ENST00000375290 ABCA3Q99758 1704 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 BCL2L11O43521 198 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 SCGB1D1O95968 90 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 ECH1Q13011 328 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 ZC3H14Q6PJT7 736 aaKnown RBP9.47□□□□□ -0.89
PTCH1-204ENST00000375290 CUTCQ9NTM9 273 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 TRBV4-1A0A0J9YWV2 114 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 TMEM269A0A1B0GVZ9 245 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 EXOSC2Q13868 293 aaKnown RBP9.47□□□□□ -0.89
PTCH1-204ENST00000375290 ACOT6Q3I5F7 207 aaPredicted RBP9.47□□□□□ -0.89
PTCH1-204ENST00000375290 ZNF628Q5EBL2 1059 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 BAP18Q8IXM2 172 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 DTWD2Q8NBA8 298 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 OR9A2Q8NGT5 310 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 FAM3DQ96BQ1 224 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 LPAR4Q99677 370 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 GLOD5A6NK44 160 aa9.46□□□□□ -0.89
PTCH1-204ENST00000375290 DDAH2O95865 285 aa9.46□□□□□ -0.89
PTCH1-204ENST00000375290 TACR1P25103 407 aa9.46□□□□□ -0.89
PTCH1-204ENST00000375290 RAB11AP62491 216 aa9.46□□□□□ -0.89
PTCH1-204ENST00000375290 PNLIPRP3Q17RR3 467 aa9.46□□□□□ -0.89
PTCH1-204ENST00000375290 IQCJQ1A5X6 159 aa9.46□□□□□ -0.89
PTCH1-204ENST00000375290 COX19Q49B96 90 aa9.46□□□□□ -0.89
PTCH1-204ENST00000375290 ZNF551Q7Z340 670 aaPredicted RBP9.46□□□□□ -0.89
PTCH1-204ENST00000375290 DUSP18Q8NEJ0 188 aa9.46□□□□□ -0.89
PTCH1-204ENST00000375290 MAGEB4O15481 346 aaPredicted RBP9.46□□□□□ -0.89
PTCH1-204ENST00000375290 TP53I3Q53FA7 332 aa9.46□□□□□ -0.89
PTCH1-204ENST00000375290 MDFIC2A0A1B0GVS7 189 aa9.46□□□□□ -0.89
PTCH1-204ENST00000375290 TMEM72A0PK05 275 aa9.46□□□□□ -0.89
PTCH1-204ENST00000375290 FIGNL1Q6PIW4 674 aa9.46□□□□□ -0.89
PTCH1-204ENST00000375290 EHFQ9NZC4 300 aa9.46□□□□□ -0.89
PTCH1-204ENST00000375290 GLTPD2A6NH11 291 aa9.46□□□□□ -0.89
PTCH1-204ENST00000375290 LGALS8O00214 317 aa9.46□□□□□ -0.89
PTCH1-204ENST00000375290 ALKBH1Q13686 389 aaKnown RBP9.46□□□□□ -0.89
PTCH1-204ENST00000375290 YOD1Q5VVQ6 348 aaPredicted RBP9.46□□□□□ -0.89
PTCH1-204ENST00000375290 KIAA0895LQ68EN5 471 aa9.46□□□□□ -0.89
PTCH1-204ENST00000375290 ZNF681Q96N22 645 aa9.46□□□□□ -0.89
PTCH1-204ENST00000375290 ELOA3CA0A087WX78 387 aaPredicted RBP9.46□□□□□ -0.9
PTCH1-204ENST00000375290 CD14P08571 375 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 APEX1P27695 318 aaKnown RBP9.46□□□□□ -0.9
PTCH1-204ENST00000375290 DUSP1P28562 367 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 EPHA4P54764 986 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 ODF4Q2M2E3 257 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 EXOSC6Q5RKV6 272 aaKnown RBP9.46□□□□□ -0.9
PTCH1-204ENST00000375290 TXNDC8Q6A555 127 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 ADAM19Q9H013 955 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 SPATA6Q9NWH7 488 aaPredicted RBP9.46□□□□□ -0.9
PTCH1-204ENST00000375290 A0A0A6YYJ9 748 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 A0A0J9YY10 115 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 A8MVM7 634 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 STK17BO94768 372 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 TMEM225BP0DP42 221 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 PTHLHP12272 177 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 TYRP1P17643 537 aa9.46□□□□□ -0.9
PTCH1-204ENST00000375290 CBLP22681 906 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms