RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 HOXD1Q9GZZ0 328 aa16.23■□□□□ 0.19
TRAF3IP1-201ENST00000373327 BAIAP2Q9UQB8 552 aa16.23■□□□□ 0.19
TRAF3IP1-201ENST00000373327 PRPS1P60891 318 aa16.23■□□□□ 0.19
TRAF3IP1-201ENST00000373327 LINC00299Q6ZSB3 139 aa16.23■□□□□ 0.19
TRAF3IP1-201ENST00000373327 BCORP1Q8N888 145 aa16.23■□□□□ 0.19
TRAF3IP1-201ENST00000373327 CFHR5Q9BXR6 569 aa16.23■□□□□ 0.19
TRAF3IP1-201ENST00000373327 AICDAQ9GZX7 198 aa16.23■□□□□ 0.19
TRAF3IP1-201ENST00000373327 MIXL1Q9H2W2 232 aa16.23■□□□□ 0.19
TRAF3IP1-201ENST00000373327 FBRSQ9HAH7 460 aa16.23■□□□□ 0.19
TRAF3IP1-201ENST00000373327 M0R233 179 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 HCRTR1O43613 425 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 H2BFMP0C1H6 154 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 GMFBP60983 142 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 SGCAQ16586 387 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 LIPNQ5VXI9 398 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 SUN5Q8TC36 379 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 ATF6BQ99941 703 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 FGF20Q9NP95 211 aaPredicted RBP16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 ALDOBP05062 364 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 VEGFCP49767 419 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 UBE2MP61081 183 aaKnown RBP16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 TRAM1Q15629 374 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 ZNF79Q15937 498 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 MRM1Q6IN84 353 aaKnown RBP16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 CBLN3Q6UW01 205 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 DGAT2L6Q6ZPD8 337 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 OR2L13Q8N349 312 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 KIAA1958Q8N8K9 716 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 BOLLQ8N9W6 283 aaKnown RBP16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 OR6N1Q8NGY5 312 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 INTS14Q96SY0 518 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 METTL17Q9H7H0 456 aaPredicted RBP16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 KLHL21Q9UJP4 597 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 RIF1Q5UIP0 2472 aaKnown RBP16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 C5orf51A6NDU8 294 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 ZNF20P17024 532 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 HLA-DMAP28067 261 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 GNG2P59768 71 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 EIF2B1Q14232 305 aaKnown RBP16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 IRF3Q14653 427 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 MAMDC2Q7Z304 686 aaPredicted RBP16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 PLPP7Q8NBV4 271 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 OR51D1Q8NGF3 324 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 OR5M1Q8NGP8 315 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 ZNF681Q96N22 645 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 LIN7BQ9HAP6 207 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 SIGLEC7Q9Y286 467 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 DTX4Q9Y2E6 619 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 FNDC1Q4ZHG4 1894 aaPredicted RBP16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 A0A1W2PQF6 199 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 ZNF726A6NNF4 738 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 ARPC5O15511 151 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 TRIM3O75382 744 aaPredicted RBP16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 TCTE1Q5JU00 501 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 WBP2NLQ6ICG8 309 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 WDR88Q6ZMY6 472 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 TMEM156Q8N614 296 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 ATOH1Q92858 354 aaPredicted RBP16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 EMC6Q9BV81 110 aa16.22■□□□□ 0.19
TRAF3IP1-201ENST00000373327 C2CD4DB7Z1M9 353 aa16.21■□□□□ 0.19
TRAF3IP1-201ENST00000373327 BRINP1O60477 761 aa16.21■□□□□ 0.19
TRAF3IP1-201ENST00000373327 HCKP08631 526 aa16.21■□□□□ 0.19
TRAF3IP1-201ENST00000373327 MAPK3P27361 379 aaPredicted RBP16.21■□□□□ 0.19
TRAF3IP1-201ENST00000373327 GLYR1Q49A26 553 aaPredicted RBP16.21■□□□□ 0.19
TRAF3IP1-201ENST00000373327 AADACL4Q5VUY2 407 aa16.21■□□□□ 0.19
TRAF3IP1-201ENST00000373327 GPR119Q8TDV5 335 aa16.21■□□□□ 0.19
TRAF3IP1-201ENST00000373327 SLC6A7Q99884 636 aa16.21■□□□□ 0.19
TRAF3IP1-201ENST00000373327 WDR77Q9BQA1 342 aaPredicted RBP16.21■□□□□ 0.19
TRAF3IP1-201ENST00000373327 SEC22CQ9BRL7 303 aa16.21■□□□□ 0.19
TRAF3IP1-201ENST00000373327 LYRM4Q9HD34 91 aa16.21■□□□□ 0.19
TRAF3IP1-201ENST00000373327 SIX6O95475 246 aa16.21■□□□□ 0.19
TRAF3IP1-201ENST00000373327 HRGP04196 525 aa16.21■□□□□ 0.19
TRAF3IP1-201ENST00000373327 RRAS2P62070 204 aaPredicted RBP16.21■□□□□ 0.19
TRAF3IP1-201ENST00000373327 TEKQ02763 1124 aa16.21■□□□□ 0.19
TRAF3IP1-201ENST00000373327 POU3F1Q03052 451 aaPredicted RBP16.21■□□□□ 0.19
TRAF3IP1-201ENST00000373327 CDC20Q12834 499 aa16.21■□□□□ 0.19
TRAF3IP1-201ENST00000373327 SERTAD2Q14140 314 aa16.21■□□□□ 0.19
TRAF3IP1-201ENST00000373327 ELMOD2Q8IZ81 293 aa16.21■□□□□ 0.19
TRAF3IP1-201ENST00000373327 ZNF350Q9GZX5 532 aa16.21■□□□□ 0.19
TRAF3IP1-201ENST00000373327 ZNF304Q9HCX3 659 aa16.21■□□□□ 0.19
TRAF3IP1-201ENST00000373327 MMP17Q9ULZ9 603 aa16.21■□□□□ 0.19
TRAF3IP1-201ENST00000373327 SIRT4Q9Y6E7 314 aaPredicted RBP16.21■□□□□ 0.19
TRAF3IP1-201ENST00000373327 ZNF593O00488 134 aaPredicted RBP16.21■□□□□ 0.18
TRAF3IP1-201ENST00000373327 THBS1P07996 1170 aa16.21■□□□□ 0.18
TRAF3IP1-201ENST00000373327 MTNR1BP49286 362 aa16.21■□□□□ 0.18
TRAF3IP1-201ENST00000373327 NXPE2Q96DL1 559 aa16.21■□□□□ 0.18
TRAF3IP1-201ENST00000373327 ELMOD3Q96FG2 381 aa16.21■□□□□ 0.18
TRAF3IP1-201ENST00000373327 RBP7Q96R05 134 aa16.21■□□□□ 0.18
TRAF3IP1-201ENST00000373327 CTRCQ99895 268 aa16.21■□□□□ 0.18
TRAF3IP1-201ENST00000373327 ARL6Q9H0F7 186 aa16.21■□□□□ 0.18
TRAF3IP1-201ENST00000373327 FGF21Q9NSA1 209 aa16.21■□□□□ 0.18
TRAF3IP1-201ENST00000373327 EPHA6Q9UF33 1036 aa16.21■□□□□ 0.18
TRAF3IP1-201ENST00000373327 TCRBP04435 133 aa16.2■□□□□ 0.18
TRAF3IP1-201ENST00000373327 OR2T7P0C7T2 308 aa16.2■□□□□ 0.18
TRAF3IP1-201ENST00000373327 MSL3P1P0C860 447 aa16.2■□□□□ 0.18
TRAF3IP1-201ENST00000373327 SPI1P17947 270 aa16.2■□□□□ 0.18
TRAF3IP1-201ENST00000373327 RIDAP52758 137 aaKnown RBP16.2■□□□□ 0.18
TRAF3IP1-201ENST00000373327 SNRPNP63162 240 aaKnown RBP16.2■□□□□ 0.18
TRAF3IP1-201ENST00000373327 TLE3Q04726 772 aa16.2■□□□□ 0.18
TRAF3IP1-201ENST00000373327 MLC1Q15049 377 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms