RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 N6AMT1Q9Y5N5 214 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 COL5A1P20908 1838 aaPredicted RBP17.05■□□□□ 0.32
USP49-202ENST00000373010 SERPINA3P01011 423 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 TFPIP10646 304 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 ITPKBP27987 946 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 UQCRC1P31930 480 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 TALDO1P37837 337 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 RPL18Q07020 188 aaKnown RBP17.05■□□□□ 0.32
USP49-202ENST00000373010 HLA-DQA1Q5Y7H0 255 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 ITFG2Q969R8 447 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 ORAI1Q96D31 301 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 ZNF486Q96H40 463 aaPredicted RBP17.05■□□□□ 0.32
USP49-202ENST00000373010 ELF4Q99607 663 aaPredicted RBP17.05■□□□□ 0.32
USP49-202ENST00000373010 VN1R1Q9GZP7 353 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 FAM157BP0CG42 384 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 GIMD1P0DJR0 217 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 GLB1P16278 677 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 ATF1P18846 271 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 NPR2P20594 1047 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 SF3A2Q15428 464 aaKnown RBP17.04■□□□□ 0.32
USP49-202ENST00000373010 LANCL3Q6ZV70 420 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 SPEM1Q8N4L4 309 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 EXD3Q8N9H8 876 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 SLC41A2Q96JW4 573 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 NUDT22Q9BRQ3 303 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 SRA1Q9HD15 236 aaKnown RBP17.04■□□□□ 0.32
USP49-202ENST00000373010 DDX28Q9NUL7 540 aaKnown RBP17.04■□□□□ 0.32
USP49-202ENST00000373010 A0A087WV48 116 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 TRAV1-2A0A0B4J238 106 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 FAM240BA0A1B0GVZ2 78 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 DCTN6O00399 190 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 IGF2P01344 180 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 SNRPBP14678 240 aaKnown RBP17.04■□□□□ 0.32
USP49-202ENST00000373010 AFF3P51826 1226 aaKnown RBP17.04■□□□□ 0.32
USP49-202ENST00000373010 DMWDQ09019 674 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 PLCXD2Q0VAA5 305 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 IL10RAQ13651 578 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 CEP78Q5JTW2 689 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 C1QL3Q5VWW1 255 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 NANOGNBQ7Z5D8 188 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 OR4D9Q8NGE8 314 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 CAPSLQ8WWF8 208 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 OIT3Q8WWZ8 545 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 SLC7A6Q92536 515 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 ZC3HAV1LQ96H79 300 aaKnown RBP17.04■□□□□ 0.32
USP49-202ENST00000373010 WWTR1Q9GZV5 400 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 ADAM19Q9H013 955 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 RXFP3Q9NSD7 469 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 CTSFQ9UBX1 484 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 KLHDC2Q9Y2U9 406 aa17.04■□□□□ 0.32
USP49-202ENST00000373010 HTR3EA5X5Y0 456 aa17.03■□□□□ 0.32
USP49-202ENST00000373010 TSPAN2O60636 221 aa17.03■□□□□ 0.32
USP49-202ENST00000373010 SDHAP31040 664 aa17.03■□□□□ 0.32
USP49-202ENST00000373010 DDOSTP39656 456 aa17.03■□□□□ 0.32
USP49-202ENST00000373010 MAGEB1P43366 347 aa17.03■□□□□ 0.32
USP49-202ENST00000373010 PTCRAQ6ISU1 281 aaPredicted RBP17.03■□□□□ 0.32
USP49-202ENST00000373010 ASB18Q6ZVZ8 466 aa17.03■□□□□ 0.32
USP49-202ENST00000373010 SCAIQ8N9R8 606 aa17.03■□□□□ 0.32
USP49-202ENST00000373010 DNASE2BQ8WZ79 361 aa17.03■□□□□ 0.32
USP49-202ENST00000373010 DAZLQ92904 295 aaKnown RBP17.03■□□□□ 0.32
USP49-202ENST00000373010 TSPAN32Q96QS1 320 aa17.03■□□□□ 0.32
USP49-202ENST00000373010 CTRCQ99895 268 aa17.03■□□□□ 0.32
USP49-202ENST00000373010 BEX2Q9BXY8 128 aa17.03■□□□□ 0.32
USP49-202ENST00000373010 FGF21Q9NSA1 209 aa17.03■□□□□ 0.32
USP49-202ENST00000373010 AK6Q9Y3D8 172 aaKnown RBP17.03■□□□□ 0.32
USP49-202ENST00000373010 ALPK2Q86TB3 2170 aa17.03■□□□□ 0.32
USP49-202ENST00000373010 A0A1B0GX78 115 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 NDUFB5O43674 189 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 NUDT14O95848 222 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 UCHL1P09936 223 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 RBMS1P29558 406 aaKnown RBP17.02■□□□□ 0.32
USP49-202ENST00000373010 PITPNBP48739 271 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 NANOS3P60323 173 aaKnown RBP17.02■□□□□ 0.32
USP49-202ENST00000373010 DCAF7P61962 342 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 MESTQ5EB52 335 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 PAMR1Q6UXH9 720 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 RELTQ969Z4 430 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 OMA1Q96E52 524 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 ABHD1Q96SE0 405 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 THAP7Q9BT49 309 aaPredicted RBP17.02■□□□□ 0.32
USP49-202ENST00000373010 SYNDIG1Q9H7V2 258 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 GRHPRQ9UBQ7 328 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 SLC6A5Q9Y345 797 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 NPFFR2Q9Y5X5 522 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 TRIOBPQ9H2D6 2365 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 TVP23AA6NH52 213 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 NOTOA8MTQ0 251 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 FLRT2O43155 660 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 FZD7O75084 574 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 EPXP11678 715 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 SLC25A1P53007 311 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 IFITM2Q01629 132 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 CARFQ8N187 725 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 DUSP18Q8NEJ0 188 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 RNF166Q96A37 237 aaPredicted RBP17.02■□□□□ 0.32
USP49-202ENST00000373010 UPRTQ96BW1 309 aa17.02■□□□□ 0.32
USP49-202ENST00000373010 ZNF501Q96CX3 271 aaPredicted RBP17.02■□□□□ 0.32
USP49-202ENST00000373010 MOV10Q9HCE1 1003 aaKnown RBP17.02■□□□□ 0.32
USP49-202ENST00000373010 ADAMTS20P59510 1910 aa17.02■□□□□ 0.31
USP49-202ENST00000373010 TMEM72A0PK05 275 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms