RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 J3KTA2 159 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 RGS11O94810 467 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 ZIC2O95409 532 aaPredicted RBP10.71□□□□□ -0.69
VCL-202ENST00000372755 ENPP1P22413 925 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 ECI1P42126 302 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 SIRPAP78324 504 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 MRPS34P82930 218 aaKnown RBP10.71□□□□□ -0.69
VCL-202ENST00000372755 TMEM41BQ5BJD5 291 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 SHEQ5VZ18 495 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 PLPP5Q8NEB5 264 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 C3orf30Q96M34 536 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 PSD2Q9BQI7 771 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 LHX3Q9UBR4 397 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 TMEM221A6NGB7 291 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 A6NIN4 97 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 WNT11O96014 354 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 ZNF728P0DKX0 622 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 GM2AP17900 193 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 SSTR2P30874 369 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 WNT7BP56706 349 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 SMAD2Q15796 467 aaKnown RBP10.71□□□□□ -0.69
VCL-202ENST00000372755 Q499Y3 187 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 OR13C9Q8NGT0 318 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 CPPED1Q9BRF8 314 aaPredicted RBP10.71□□□□□ -0.69
VCL-202ENST00000372755 CSNK1G1Q9HCP0 422 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 SMCO4Q9NRQ5 59 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 H0YIV9 168 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 FADS1O60427 444 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 PRKACAP17612 351 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 NPBWR1P48145 328 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 C17orf67Q0P5P2 114 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 MANEAQ5SRI9 462 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 VHLLQ6RSH7 139 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 GAREM2Q75VX8 874 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 SLC43A2Q8N370 569 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 SPHK1Q9NYA1 384 aa10.71□□□□□ -0.69
VCL-202ENST00000372755 TRBV4-1A0A0J9YWV2 114 aa10.71□□□□□ -0.7
VCL-202ENST00000372755 CNMDO75829 334 aa10.71□□□□□ -0.7
VCL-202ENST00000372755 CR2P20023 1033 aa10.71□□□□□ -0.7
VCL-202ENST00000372755 ITGB8P26012 769 aa10.71□□□□□ -0.7
VCL-202ENST00000372755 EIF1P41567 113 aaKnown RBP10.71□□□□□ -0.7
VCL-202ENST00000372755 MTNR1BP49286 362 aa10.71□□□□□ -0.7
VCL-202ENST00000372755 PLK5Q496M5 336 aa10.71□□□□□ -0.7
VCL-202ENST00000372755 UBTD2Q8WUN7 234 aa10.71□□□□□ -0.7
VCL-202ENST00000372755 TMED7-TICAM2A0A0A6YYA0 188 aa10.71□□□□□ -0.7
VCL-202ENST00000372755 SULT1B1O43704 296 aa10.71□□□□□ -0.7
VCL-202ENST00000372755 SCGB1D1O95968 90 aa10.71□□□□□ -0.7
VCL-202ENST00000372755 C21orf33P30042 268 aaPredicted RBP10.71□□□□□ -0.7
VCL-202ENST00000372755 SERPINF1P36955 418 aa10.71□□□□□ -0.7
VCL-202ENST00000372755 C2orf76Q3KRA6 126 aa10.71□□□□□ -0.7
VCL-202ENST00000372755 BCL7AQ4VC05 210 aa10.71□□□□□ -0.7
VCL-202ENST00000372755 BEX5Q5H9J7 111 aa10.71□□□□□ -0.7
VCL-202ENST00000372755 ESPNLQ6ZVH7 1005 aa10.71□□□□□ -0.7
VCL-202ENST00000372755 SLC22A24Q8N4F4 322 aa10.71□□□□□ -0.7
VCL-202ENST00000372755 ZNF439Q8NDP4 499 aa10.71□□□□□ -0.7
VCL-202ENST00000372755 ARRDC2Q8TBH0 407 aa10.71□□□□□ -0.7
VCL-202ENST00000372755 SLC39A9Q9NUM3 307 aa10.71□□□□□ -0.7
VCL-202ENST00000372755 TMED7Q9Y3B3 224 aa10.71□□□□□ -0.7
VCL-202ENST00000372755 PEAK1Q9H792 1746 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 NCR1O76036 304 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 GASTP01350 101 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 GPLD1P80108 840 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 ST7LQ8TDW4 575 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 LCORQ96JN0 433 aaPredicted RBP10.7□□□□□ -0.7
VCL-202ENST00000372755 EMCNQ9ULC0 261 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 ETV7Q9Y603 341 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 B4GAT1O43505 415 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 HCRTR1O43613 425 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 PRICKLE3O43900 615 aaPredicted RBP10.7□□□□□ -0.7
VCL-202ENST00000372755 CARD18P57730 90 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 Q6ZTK2 550 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 TMEM178AQ8NBL3 297 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 SECTM1Q8WVN6 248 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 MMACHCQ9Y4U1 282 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 ZNF587BE7ETH6 402 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 TXNL1O43396 289 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 PSMB1P20618 241 aaKnown RBP10.7□□□□□ -0.7
VCL-202ENST00000372755 GSK3AP49840 483 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 P2RX1P51575 399 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 MAT1AQ00266 395 aaKnown RBP10.7□□□□□ -0.7
VCL-202ENST00000372755 REEP5Q00765 189 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 GALEQ14376 348 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 NXNL2Q5VZ03 156 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 C15orf54Q8N8G6 183 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 ZFPM2Q8WW38 1151 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 SELENOIQ9C0D9 397 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 COPS3Q9UNS2 423 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 CORINQ9Y5Q5 1042 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 OR7A17O14581 309 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 UTS2O95399 124 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 CLDN1O95832 211 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 T-ENOLP0DO92 83 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 SLC5A2P31639 672 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 SLC1A3P43003 542 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 SPCS2Q15005 226 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 YIF1BQ5BJH7 314 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 OR2G6Q5TZ20 316 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 RHOXF1Q8NHV9 184 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 CHTF18Q8WVB6 975 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 MKRN2Q9H000 416 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms