RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 C16orf89Q6UX73 402 aa19.8■□□□□ 0.76
ECHDC1-203ENST00000368291 TSEN54Q7Z6J9 526 aaKnown RBP19.8■□□□□ 0.76
ECHDC1-203ENST00000368291 ZNF433Q8N7K0 673 aaPredicted RBP19.8■□□□□ 0.76
ECHDC1-203ENST00000368291 RBM15BQ8NDT2 890 aaKnown RBP19.8■□□□□ 0.76
ECHDC1-203ENST00000368291 STEAP2Q8NFT2 490 aa19.8■□□□□ 0.76
ECHDC1-203ENST00000368291 BCAS4Q8TDM0 211 aa19.8■□□□□ 0.76
ECHDC1-203ENST00000368291 KISS1RQ969F8 398 aaPredicted RBP19.8■□□□□ 0.76
ECHDC1-203ENST00000368291 CLEC4MQ9H2X3 399 aaPredicted RBP19.8■□□□□ 0.76
ECHDC1-203ENST00000368291 SLC7A10Q9NS82 523 aa19.8■□□□□ 0.76
ECHDC1-203ENST00000368291 PARPBPQ9NWS1 579 aa19.8■□□□□ 0.76
ECHDC1-203ENST00000368291 ZNF226Q9NYT6 803 aa19.8■□□□□ 0.76
ECHDC1-203ENST00000368291 C6orf203Q9P0P8 240 aaPredicted RBP19.8■□□□□ 0.76
ECHDC1-203ENST00000368291 CORINQ9Y5Q5 1042 aa19.8■□□□□ 0.76
ECHDC1-203ENST00000368291 LOC102725191A0A1B0GVB3 256 aa19.79■□□□□ 0.76
ECHDC1-203ENST00000368291 PDLIM1O00151 329 aa19.79■□□□□ 0.76
ECHDC1-203ENST00000368291 HPRP00739 348 aa19.79■□□□□ 0.76
ECHDC1-203ENST00000368291 LOXP28300 417 aaPredicted RBP19.79■□□□□ 0.76
ECHDC1-203ENST00000368291 ZNF74Q16587 644 aa19.79■□□□□ 0.76
ECHDC1-203ENST00000368291 IFI44LQ53G44 452 aa19.79■□□□□ 0.76
ECHDC1-203ENST00000368291 SAMD4BQ5PRF9 694 aaKnown RBP19.79■□□□□ 0.76
ECHDC1-203ENST00000368291 NHLRC1Q6VVB1 395 aa19.79■□□□□ 0.76
ECHDC1-203ENST00000368291 AAED1Q7RTV5 226 aa19.79■□□□□ 0.76
ECHDC1-203ENST00000368291 UBE2J2Q8N2K1 259 aa19.79■□□□□ 0.76
ECHDC1-203ENST00000368291 SCAIQ8N9R8 606 aa19.79■□□□□ 0.76
ECHDC1-203ENST00000368291 TMEM255BQ8WV15 326 aa19.79■□□□□ 0.76
ECHDC1-203ENST00000368291 GEMIN6Q8WXD5 167 aaKnown RBP19.79■□□□□ 0.76
ECHDC1-203ENST00000368291 NRGNQ92686 78 aa19.79■□□□□ 0.76
ECHDC1-203ENST00000368291 PRRC1Q96M27 445 aa19.79■□□□□ 0.76
ECHDC1-203ENST00000368291 SLC19A3Q9BZV2 496 aa19.79■□□□□ 0.76
ECHDC1-203ENST00000368291 DCAF13Q9NV06 445 aaKnown RBP19.79■□□□□ 0.76
ECHDC1-203ENST00000368291 NDE1Q9NXR1 346 aa19.79■□□□□ 0.76
ECHDC1-203ENST00000368291 MRPL39Q9NYK5 338 aaKnown RBP19.79■□□□□ 0.76
ECHDC1-203ENST00000368291 B2RBV5 119 aa19.78■□□□□ 0.76
ECHDC1-203ENST00000368291 J3KTA2 159 aa19.78■□□□□ 0.76
ECHDC1-203ENST00000368291 FFAR1O14842 300 aa19.78■□□□□ 0.76
ECHDC1-203ENST00000368291 MT-ATP6P00846 226 aa19.78■□□□□ 0.76
ECHDC1-203ENST00000368291 ITGA5P08648 1049 aa19.78■□□□□ 0.76
ECHDC1-203ENST00000368291 THRBP10828 461 aa19.78■□□□□ 0.76
ECHDC1-203ENST00000368291 IL32P24001 234 aa19.78■□□□□ 0.76
ECHDC1-203ENST00000368291 YAP1P46937 504 aaKnown RBP19.78■□□□□ 0.76
ECHDC1-203ENST00000368291 SELENOPP49908 381 aa19.78■□□□□ 0.76
ECHDC1-203ENST00000368291 MNAT1P51948 309 aa19.78■□□□□ 0.76
ECHDC1-203ENST00000368291 UGT2B15P54855 530 aa19.78■□□□□ 0.76
ECHDC1-203ENST00000368291 MXRA7P84157 204 aa19.78■□□□□ 0.76
ECHDC1-203ENST00000368291 FAPQ12884 760 aa19.78■□□□□ 0.76
ECHDC1-203ENST00000368291 BHLHA15Q7RTS1 189 aaPredicted RBP19.78■□□□□ 0.76
ECHDC1-203ENST00000368291 CDC20BQ86Y33 519 aa19.78■□□□□ 0.76
ECHDC1-203ENST00000368291 FAM86B1Q8N7N1 296 aa19.78■□□□□ 0.76
ECHDC1-203ENST00000368291 ASPNQ9BXN1 380 aa19.78■□□□□ 0.76
ECHDC1-203ENST00000368291 GORASP2Q9H8Y8 452 aa19.78■□□□□ 0.76
ECHDC1-203ENST00000368291 ASB6Q9NWX5 421 aa19.78■□□□□ 0.76
ECHDC1-203ENST00000368291 RAI1Q7Z5J4 1906 aaPredicted RBP19.77■□□□□ 0.76
ECHDC1-203ENST00000368291 KPNA4O00629 521 aaPredicted RBP19.77■□□□□ 0.76
ECHDC1-203ENST00000368291 KLF4O43474 513 aa19.77■□□□□ 0.76
ECHDC1-203ENST00000368291 TRAF3IP2O43734 574 aaPredicted RBP19.77■□□□□ 0.76
ECHDC1-203ENST00000368291 PRSS23O95084 383 aa19.77■□□□□ 0.76
ECHDC1-203ENST00000368291 CH25HO95992 272 aa19.77■□□□□ 0.76
ECHDC1-203ENST00000368291 IFNW1P05000 195 aa19.77■□□□□ 0.76
ECHDC1-203ENST00000368291 HLA-DOBP13765 273 aa19.77■□□□□ 0.76
ECHDC1-203ENST00000368291 ZNF43P17038 809 aa19.77■□□□□ 0.76
ECHDC1-203ENST00000368291 TAB1Q15750 504 aa19.77■□□□□ 0.76
ECHDC1-203ENST00000368291 SEZ6L2Q6UXD5 910 aa19.77■□□□□ 0.76
ECHDC1-203ENST00000368291 RINLQ6ZS11 566 aa19.77■□□□□ 0.76
ECHDC1-203ENST00000368291 FKBP9P1Q75LS8 142 aa19.77■□□□□ 0.76
ECHDC1-203ENST00000368291 SLC46A3Q7Z3Q1 461 aa19.77■□□□□ 0.76
ECHDC1-203ENST00000368291 C10orf53Q8N6V4 93 aa19.77■□□□□ 0.76
ECHDC1-203ENST00000368291 LRRC17Q8N6Y2 441 aa19.77■□□□□ 0.76
ECHDC1-203ENST00000368291 PFN4Q8NHR9 129 aa19.77■□□□□ 0.76
ECHDC1-203ENST00000368291 SLCO5A1Q9H2Y9 848 aa19.77■□□□□ 0.76
ECHDC1-203ENST00000368291 MAN2C1Q9NTJ4 1040 aa19.77■□□□□ 0.76
ECHDC1-203ENST00000368291 RPS6KA6Q9UK32 745 aa19.77■□□□□ 0.76
ECHDC1-203ENST00000368291 ANKRD17O75179 2603 aaKnown RBP19.77■□□□□ 0.76
ECHDC1-203ENST00000368291 PLPP3O14495 311 aa19.76■□□□□ 0.75
ECHDC1-203ENST00000368291 ZNF432O94892 652 aa19.76■□□□□ 0.75
ECHDC1-203ENST00000368291 CALB2P22676 271 aa19.76■□□□□ 0.75
ECHDC1-203ENST00000368291 RBM34P42696 430 aaKnown RBP19.76■□□□□ 0.75
ECHDC1-203ENST00000368291 CLDN17P56750 224 aa19.76■□□□□ 0.75
ECHDC1-203ENST00000368291 LGALS3BPQ08380 585 aa19.76■□□□□ 0.75
ECHDC1-203ENST00000368291 PMS2P3Q13401 168 aa19.76■□□□□ 0.75
ECHDC1-203ENST00000368291 OR5J2Q8NH18 312 aa19.76■□□□□ 0.75
ECHDC1-203ENST00000368291 LIME1Q9H400 295 aa19.76■□□□□ 0.75
ECHDC1-203ENST00000368291 FKRPQ9H9S5 495 aa19.76■□□□□ 0.75
ECHDC1-203ENST00000368291 ENO4A6NNW6 628 aa19.75■□□□□ 0.75
ECHDC1-203ENST00000368291 MT-ND1P03886 318 aa19.75■□□□□ 0.75
ECHDC1-203ENST00000368291 ASAH2BP0C7U1 165 aa19.75■□□□□ 0.75
ECHDC1-203ENST00000368291 NQO1P15559 274 aaKnown RBP19.75■□□□□ 0.75
ECHDC1-203ENST00000368291 DNAJA1P31689 397 aaKnown RBP19.75■□□□□ 0.75
ECHDC1-203ENST00000368291 LSM11P83369 360 aaKnown RBP eCLIP19.75■□□□□ 0.75
ECHDC1-203ENST00000368291 PUDPQ08623 228 aa19.75■□□□□ 0.75
ECHDC1-203ENST00000368291 ST3GAL3Q11203 375 aa19.75■□□□□ 0.75
ECHDC1-203ENST00000368291 FOXD4Q12950 439 aaPredicted RBP19.75■□□□□ 0.75
ECHDC1-203ENST00000368291 SPATS1Q496A3 300 aa19.75■□□□□ 0.75
ECHDC1-203ENST00000368291 NIPAL3Q6P499 406 aa19.75■□□□□ 0.75
ECHDC1-203ENST00000368291 LINGO2Q7L985 606 aa19.75■□□□□ 0.75
ECHDC1-203ENST00000368291 TRPM8Q7Z2W7 1104 aa19.75■□□□□ 0.75
ECHDC1-203ENST00000368291 OFCC1Q8IZS5 231 aa19.75■□□□□ 0.75
ECHDC1-203ENST00000368291 TMEM239Q8WW34 195 aa19.75■□□□□ 0.75
ECHDC1-203ENST00000368291 HS3ST6Q96QI5 342 aa19.75■□□□□ 0.75
ECHDC1-203ENST00000368291 PLEKHF2Q9H8W4 249 aa19.75■□□□□ 0.75
ECHDC1-203ENST00000368291 C20orf141Q9NUB4 165 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms