RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 TCTN2Q96GX1 697 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 GFI1Q99684 422 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 C20orf85Q9H1P6 137 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 NANSQ9NR45 359 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 GPR27Q9NS67 375 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 C2orf42Q9NWW7 574 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 ERVK-19Q9WJR5 959 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 ETV7Q9Y603 341 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 LRP4O75096 1905 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 TICRRQ7Z2Z1 1910 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 HSPB2A8KAH6 182 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 LDOC1O95751 146 aaPredicted RBP13.04□□□□□ -0.32
CD48-201ENST00000368045 RAF1P04049 648 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 IGHV4-34P06331 123 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 ANKRD34CP0C6C1 535 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 CTSEP14091 401 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 EN2P19622 333 aaPredicted RBP13.04□□□□□ -0.32
CD48-201ENST00000368045 SDHAP31040 664 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 NUDT1P36639 197 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 P2RX3P56373 397 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 SCAND1P57086 179 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 CAMK2BQ13554 666 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 HSPB2Q16082 182 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 ZNF74Q16587 644 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 ST3GAL2Q16842 350 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 NDUFAF6Q330K2 333 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 ESCO2Q56NI9 601 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 RNASE12Q5GAN4 147 aaKnown RBP13.04□□□□□ -0.32
CD48-201ENST00000368045 FNDC7Q5VTL7 733 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 KIAA0895LQ68EN5 471 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 ZNF687Q8N1G0 1237 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 EXD3Q8N9H8 876 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 LRRC75AQ8NAA5 344 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 MOSPD2Q8NHP6 518 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 ZDHHC1Q8WTX9 485 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 MARVELD3Q96A59 401 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 SLC25A38Q96DW6 304 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 ZNF285Q96NJ3 590 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 C12orf10Q9HB07 376 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 UBQLN4Q9NRR5 601 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 ANKRD10Q9NXR5 420 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 MMP17Q9ULZ9 603 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 CLDN16Q9Y5I7 305 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 LAMA2P24043 3122 aaKnown RBP13.04□□□□□ -0.32
CD48-201ENST00000368045 A0A1B0GUH1 482 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 LINC00862A6NCI5 91 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 SSNA1O43805 119 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 SNAPC5O75971 98 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 ZFPL1O95159 310 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 IGLV3-19P01714 112 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 CTSBP07858 339 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 CELA2BP08218 269 aaPredicted RBP13.04□□□□□ -0.32
CD48-201ENST00000368045 PSMB1P20618 241 aaKnown RBP13.04□□□□□ -0.32
CD48-201ENST00000368045 CDKN2AP42771 156 aaKnown RBP13.04□□□□□ -0.32
CD48-201ENST00000368045 BLKP51451 505 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 TFF2Q03403 129 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 FZD2Q14332 565 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 Q499Y3 187 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 TMEM31Q5JXX7 168 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 HES5Q5TA89 166 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 METTL11BQ5VVY1 283 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 OLFML2AQ68BL7 652 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 TEX261Q6UWH6 196 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 LYPD8Q6UX82 237 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 LRRN1Q6UXK5 716 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 ESPNLQ6ZVH7 1005 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 FAM122BQ7Z309 247 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 SFTPA2Q8IWL1 248 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 ZPLD1Q8TCW7 415 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 FCAMRQ8WWV6 532 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 RGP1Q92546 391 aaPredicted RBP13.04□□□□□ -0.32
CD48-201ENST00000368045 RNF166Q96A37 237 aaPredicted RBP13.04□□□□□ -0.32
CD48-201ENST00000368045 S100A16Q96FQ6 103 aaKnown RBP13.04□□□□□ -0.32
CD48-201ENST00000368045 MED30Q96HR3 178 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 NKX2-4Q9H2Z4 354 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 AUNIPQ9H7T9 357 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 HRASLSQ9HDD0 168 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 DLL4Q9NR61 685 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 CLEC1BQ9P126 229 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 FBXL3Q9UKT7 428 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 U3KQ87 197 aa13.04□□□□□ -0.32
CD48-201ENST00000368045 TRBV5-5A0A0J9YX44 114 aa13.03□□□□□ -0.32
CD48-201ENST00000368045 ACOD1A6NK06 481 aa13.03□□□□□ -0.32
CD48-201ENST00000368045 SLC22A5O76082 557 aa13.03□□□□□ -0.32
CD48-201ENST00000368045 UBL4AP11441 157 aa13.03□□□□□ -0.32
CD48-201ENST00000368045 CXCL3P19876 107 aa13.03□□□□□ -0.32
CD48-201ENST00000368045 AQP2P41181 271 aa13.03□□□□□ -0.32
CD48-201ENST00000368045 PGDP52209 483 aa13.03□□□□□ -0.32
CD48-201ENST00000368045 NANOS3P60323 173 aaKnown RBP13.03□□□□□ -0.32
CD48-201ENST00000368045 CAMK2DQ13557 499 aa13.03□□□□□ -0.32
CD48-201ENST00000368045 ALKBH1Q13686 389 aaKnown RBP13.03□□□□□ -0.32
CD48-201ENST00000368045 PRSS45Q7RTY3 260 aa13.03□□□□□ -0.32
CD48-201ENST00000368045 ZNF761Q86XN6 746 aaPredicted RBP13.03□□□□□ -0.32
CD48-201ENST00000368045 OR6V1Q8N148 313 aa13.03□□□□□ -0.32
CD48-201ENST00000368045 OR5AK2Q8NH90 309 aa13.03□□□□□ -0.32
CD48-201ENST00000368045 THRSPQ92748 146 aa13.03□□□□□ -0.32
CD48-201ENST00000368045 HAVCR1Q96D42 359 aa13.03□□□□□ -0.32
CD48-201ENST00000368045 LCORQ96JN0 433 aaPredicted RBP13.03□□□□□ -0.32
CD48-201ENST00000368045 Q96M85 177 aa13.03□□□□□ -0.32
CD48-201ENST00000368045 SORCS2Q96PQ0 1159 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms