RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 LAMP2P13473 410 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 HOXB1P14653 301 aaPredicted RBP11.69□□□□□ -0.54
VAMP1-201ENST00000361716 KHKP50053 298 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 BTN3A2P78410 334 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 NIPAL3Q6P499 406 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 LINC00471Q8N535 108 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 WDSUB1Q8N9V3 476 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 SDR9C7Q8NEX9 313 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 NUP43Q8NFH3 380 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 OR4C16Q8NGL9 310 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 CA5BP1Q8WTZ4 195 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 NKD1Q969G9 470 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 NXPE3Q969Y0 559 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 HHIPL1Q96JK4 782 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 ARL5BQ96KC2 179 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 NPFFR2Q9Y5X5 522 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 GBF1Q92538 1859 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 SCN10AQ9Y5Y9 1956 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 C5orf51A6NDU8 294 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 M0R036 132 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 C6P13671 934 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 DEFA6Q01524 100 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 ZNF805Q5CZA5 627 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 CYB5R2Q6BCY4 276 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 ADAM5Q6NVV9 412 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 ZNF620Q6ZNG0 422 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 CDK20Q8IZL9 346 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 KREMEN2Q8NCW0 462 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 TMIEQ8NEW7 156 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 RHOVQ96L33 236 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 PARP12Q9H0J9 701 aaKnown RBP11.69□□□□□ -0.54
VAMP1-201ENST00000361716 TSPAN10Q9H1Z9 355 aaPredicted RBP11.69□□□□□ -0.54
VAMP1-201ENST00000361716 PIGMQ9H3S5 423 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 KCNK15Q9H427 330 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 MED9Q9NWA0 146 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 SLC23A2Q9UGH3 650 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 KLF2Q9Y5W3 355 aaPredicted RBP11.69□□□□□ -0.54
VAMP1-201ENST00000361716 ZNF780BQ9Y6R6 833 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 MYO15AQ9UKN7 3530 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 RTTNQ86VV8 2226 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 LRRC72A6NJI9 287 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 KIAA0355O15063 1070 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 GP1BAP07359 652 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 DAOP14920 347 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 PRLHRP49683 370 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 IKZF1Q13422 519 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 NCMAPQ5T1S8 102 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 POMZP3Q6PJE2 187 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 TAF8Q7Z7C8 310 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 OR10G6Q8NH81 332 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 HSPA12BQ96MM6 686 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 C6orf106Q9H6K1 298 aaPredicted RBP11.69□□□□□ -0.54
VAMP1-201ENST00000361716 MRPS18AQ9NVS2 196 aaKnown RBP11.69□□□□□ -0.54
VAMP1-201ENST00000361716 ATG4BQ9Y4P1 393 aa11.69□□□□□ -0.54
VAMP1-201ENST00000361716 A0A1B0GV50 99 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 UNC119BA6NIH7 251 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 RNGTTO60942 597 aaKnown RBP11.68□□□□□ -0.54
VAMP1-201ENST00000361716 NFATC1O95644 943 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 IGHA1P01876 353 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 SNRNP70P08621 437 aaKnown RBP11.68□□□□□ -0.54
VAMP1-201ENST00000361716 CCR4P51679 360 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 SKP1P63208 163 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 AIMP2Q13155 320 aaKnown RBP11.68□□□□□ -0.54
VAMP1-201ENST00000361716 TMEM44Q2T9K0 475 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 HENMT1Q5T8I9 393 aaKnown RBP11.68□□□□□ -0.54
VAMP1-201ENST00000361716 MAMSTRQ6ZN01 415 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 RHOUQ7L0Q8 258 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 ZNF627Q7L945 461 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 CXorf40AQ8TE69 158 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 PAPOLGQ9BWT3 736 aaKnown RBP11.68□□□□□ -0.54
VAMP1-201ENST00000361716 POFUT1Q9H488 388 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 RASL12Q9NYN1 266 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 WDR45Q9Y484 360 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 CARNS1A5YM72 827 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 NAP1L6A6NFF2 107 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 OR5H14A6NHG9 310 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 ZNF879B4DU55 563 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 EIF1BO60739 113 aaKnown RBP11.68□□□□□ -0.54
VAMP1-201ENST00000361716 NDUFB6O95139 128 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 IFNA4P05014 189 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 SRMP19623 302 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 CPT2P23786 658 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 EIF1P41567 113 aaKnown RBP11.68□□□□□ -0.54
VAMP1-201ENST00000361716 NRG3P56975 720 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 TCEAL5Q5H9L2 206 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 ACER2Q5QJU3 275 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 SLC25A30Q5SVS4 291 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 TMEM215Q68D42 235 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 OR4E2Q8NGC2 313 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 OR52E2Q8NGJ4 325 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 OVCA2Q8WZ82 227 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 CAMK1GQ96NX5 476 aa11.68□□□□□ -0.54
VAMP1-201ENST00000361716 A0A087WV48 116 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 ACOT7O00154 380 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 EPPINO95925 133 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 SBK2P0C263 348 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 TAS2R38P59533 333 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 PPIAP62937 165 aaKnown RBP11.67□□□□□ -0.54
VAMP1-201ENST00000361716 KLHL26Q53HC5 615 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 EXOSC6Q5RKV6 272 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms