RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 CDH15P55291 814 aa18.26■□□□□ 0.51
CD47-202ENST00000361309 CLDN17P56750 224 aa18.26■□□□□ 0.51
CD47-202ENST00000361309 ADRM1Q16186 407 aa18.26■□□□□ 0.51
CD47-202ENST00000361309 CDK20Q8IZL9 346 aa18.26■□□□□ 0.51
CD47-202ENST00000361309 CLIP4Q8N3C7 705 aa18.26■□□□□ 0.51
CD47-202ENST00000361309 UBASH3BQ8TF42 649 aa18.26■□□□□ 0.51
CD47-202ENST00000361309 SLC25A36Q96CQ1 311 aa18.26■□□□□ 0.51
CD47-202ENST00000361309 MEAF6Q9HAF1 191 aa18.26■□□□□ 0.51
CD47-202ENST00000361309 DYNLRB1Q9NP97 96 aa18.26■□□□□ 0.51
CD47-202ENST00000361309 P2RX2Q9UBL9 471 aa18.26■□□□□ 0.51
CD47-202ENST00000361309 ZNF443Q9Y2A4 671 aaPredicted RBP18.26■□□□□ 0.51
CD47-202ENST00000361309 PCDHB14Q9Y5E9 798 aa18.26■□□□□ 0.51
CD47-202ENST00000361309 DSPPQ9NZW4 1301 aa18.25■□□□□ 0.51
CD47-202ENST00000361309 IGHV2OR16-5A0A0B4J2B6 119 aa18.25■□□□□ 0.51
CD47-202ENST00000361309 LYNX1G3V0Z9 82 aa18.25■□□□□ 0.51
CD47-202ENST00000361309 RPL36A-HNRNPH2H7BZ11 118 aa18.25■□□□□ 0.51
CD47-202ENST00000361309 ZNF432O94892 652 aa18.25■□□□□ 0.51
CD47-202ENST00000361309 LYNX1P0DP58 116 aa18.25■□□□□ 0.51
CD47-202ENST00000361309 PNMTP11086 282 aa18.25■□□□□ 0.51
CD47-202ENST00000361309 IFNGR1P15260 489 aa18.25■□□□□ 0.51
CD47-202ENST00000361309 NPRL3Q12980 569 aa18.25■□□□□ 0.51
CD47-202ENST00000361309 RIN1Q13671 783 aa18.25■□□□□ 0.51
CD47-202ENST00000361309 ATG16L1Q676U5 607 aa18.25■□□□□ 0.51
CD47-202ENST00000361309 OGFOD2Q6N063 350 aa18.25■□□□□ 0.51
CD47-202ENST00000361309 MEX3DQ86XN8 651 aaKnown RBP18.25■□□□□ 0.51
CD47-202ENST00000361309 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.25■□□□□ 0.51
CD47-202ENST00000361309 MFSD8Q8NHS3 518 aa18.25■□□□□ 0.51
CD47-202ENST00000361309 STK35Q8TDR2 534 aa18.25■□□□□ 0.51
CD47-202ENST00000361309 CKAP2Q8WWK9 683 aa18.25■□□□□ 0.51
CD47-202ENST00000361309 AIG1Q9NVV5 245 aa18.25■□□□□ 0.51
CD47-202ENST00000361309 A0A096LPI6 279 aa18.24■□□□□ 0.51
CD47-202ENST00000361309 ZNF503-AS2A6NEH8 195 aa18.24■□□□□ 0.51
CD47-202ENST00000361309 FTCDNL1E5RQL4 147 aa18.24■□□□□ 0.51
CD47-202ENST00000361309 BIRC5O15392 142 aa18.24■□□□□ 0.51
CD47-202ENST00000361309 AHSA1O95433 338 aa18.24■□□□□ 0.51
CD47-202ENST00000361309 KRT75O95678 551 aa18.24■□□□□ 0.51
CD47-202ENST00000361309 ADRA2AP08913 450 aa18.24■□□□□ 0.51
CD47-202ENST00000361309 ETFAP13804 333 aa18.24■□□□□ 0.51
CD47-202ENST00000361309 ZNF43P17038 809 aa18.24■□□□□ 0.51
CD47-202ENST00000361309 CCNIQ14094 377 aa18.24■□□□□ 0.51
CD47-202ENST00000361309 RNF220Q5VTB9 566 aa18.24■□□□□ 0.51
CD47-202ENST00000361309 RINLQ6ZS11 566 aa18.24■□□□□ 0.51
CD47-202ENST00000361309 ANKK1Q8NFD2 765 aa18.24■□□□□ 0.51
CD47-202ENST00000361309 ZNF837Q96EG3 531 aaPredicted RBP18.24■□□□□ 0.51
CD47-202ENST00000361309 PTDSS2Q9BVG9 487 aa18.24■□□□□ 0.51
CD47-202ENST00000361309 TPK1Q9H3S4 243 aa18.24■□□□□ 0.51
CD47-202ENST00000361309 GPR35Q9HC97 309 aa18.24■□□□□ 0.51
CD47-202ENST00000361309 SLC6A13Q9NSD5 602 aa18.24■□□□□ 0.51
CD47-202ENST00000361309 PNPOQ9NVS9 261 aa18.24■□□□□ 0.51
CD47-202ENST00000361309 CALML5Q9NZT1 146 aa18.24■□□□□ 0.51
CD47-202ENST00000361309 SEC14L4Q9UDX3 406 aa18.24■□□□□ 0.51
CD47-202ENST00000361309 HAO1Q9UJM8 370 aa18.24■□□□□ 0.51
CD47-202ENST00000361309 RCE1Q9Y256 329 aa18.24■□□□□ 0.51
CD47-202ENST00000361309 CHST2Q9Y4C5 530 aa18.24■□□□□ 0.51
CD47-202ENST00000361309 SLC43A1O75387 559 aa18.23■□□□□ 0.51
CD47-202ENST00000361309 BCHEP06276 602 aa18.23■□□□□ 0.51
CD47-202ENST00000361309 ARR3P36575 388 aa18.23■□□□□ 0.51
CD47-202ENST00000361309 RPS5P46782 204 aaKnown RBP18.23■□□□□ 0.51
CD47-202ENST00000361309 MVDP53602 400 aa18.23■□□□□ 0.51
CD47-202ENST00000361309 CRISP3P54108 245 aa18.23■□□□□ 0.51
CD47-202ENST00000361309 RUNX1T1Q06455 604 aa18.23■□□□□ 0.51
CD47-202ENST00000361309 LRRC74AQ0VAA2 488 aa18.23■□□□□ 0.51
CD47-202ENST00000361309 SNTB2Q13425 540 aaKnown RBP18.23■□□□□ 0.51
CD47-202ENST00000361309 DAG1Q14118 895 aa18.23■□□□□ 0.51
CD47-202ENST00000361309 LARS2Q15031 903 aaKnown RBP18.23■□□□□ 0.51
CD47-202ENST00000361309 CEACAM16Q2WEN9 425 aa18.23■□□□□ 0.51
CD47-202ENST00000361309 RPS26P11Q5JNZ5 115 aaPredicted RBP18.23■□□□□ 0.51
CD47-202ENST00000361309 KRT80Q6KB66 452 aa18.23■□□□□ 0.51
CD47-202ENST00000361309 C12orf54Q6X4T0 127 aa18.23■□□□□ 0.51
CD47-202ENST00000361309 SERPINA11Q86U17 422 aa18.23■□□□□ 0.51
CD47-202ENST00000361309 MDP1Q86V88 176 aa18.23■□□□□ 0.51
CD47-202ENST00000361309 GPR137CQ8N3F9 429 aa18.23■□□□□ 0.51
CD47-202ENST00000361309 KTI12Q96EK9 354 aaPredicted RBP18.23■□□□□ 0.51
CD47-202ENST00000361309 CRLF2Q9HC73 371 aa18.23■□□□□ 0.51
CD47-202ENST00000361309 METRNQ9UJH8 293 aa18.23■□□□□ 0.51
CD47-202ENST00000361309 RFXANKO14593 260 aa18.22■□□□□ 0.51
CD47-202ENST00000361309 BGNP21810 368 aa18.22■□□□□ 0.51
CD47-202ENST00000361309 GTF2E2P29084 291 aaKnown RBP18.22■□□□□ 0.51
CD47-202ENST00000361309 CRATP43155 626 aa18.22■□□□□ 0.51
CD47-202ENST00000361309 CAPZA2P47755 286 aa18.22■□□□□ 0.51
CD47-202ENST00000361309 DVL1P1P54792 670 aaPredicted RBP18.22■□□□□ 0.51
CD47-202ENST00000361309 VSNL1P62760 191 aa18.22■□□□□ 0.51
CD47-202ENST00000361309 IL1RL1Q01638 556 aa18.22■□□□□ 0.51
CD47-202ENST00000361309 EGR4Q05215 589 aa18.22■□□□□ 0.51
CD47-202ENST00000361309 UGT2A3Q6UWM9 527 aa18.22■□□□□ 0.51
CD47-202ENST00000361309 KIRREL3Q8IZU9 778 aa18.22■□□□□ 0.51
CD47-202ENST00000361309 SLC38A5Q8WUX1 472 aa18.22■□□□□ 0.51
CD47-202ENST00000361309 OXGR1Q96P68 337 aa18.22■□□□□ 0.51
CD47-202ENST00000361309 ZBTB18Q99592 522 aa18.22■□□□□ 0.51
CD47-202ENST00000361309 SPATA9Q9BWV2 254 aa18.22■□□□□ 0.51
CD47-202ENST00000361309 OCEL1Q9H607 264 aa18.22■□□□□ 0.51
CD47-202ENST00000361309 NOX3Q9HBY0 568 aa18.22■□□□□ 0.51
CD47-202ENST00000361309 B3GAT1Q9P2W7 334 aa18.22■□□□□ 0.51
CD47-202ENST00000361309 ZNF232Q9UNY5 417 aa18.22■□□□□ 0.51
CD47-202ENST00000361309 GPR45Q9Y5Y3 372 aa18.22■□□□□ 0.51
CD47-202ENST00000361309 SDHDO14521 159 aa18.21■□□□□ 0.51
CD47-202ENST00000361309 SEC14L2O76054 403 aa18.21■□□□□ 0.51
CD47-202ENST00000361309 CFPP27918 469 aa18.21■□□□□ 0.51
CD47-202ENST00000361309 DSTNP60981 165 aa18.21■□□□□ 0.51
CD47-202ENST00000361309 HOXC5Q00444 222 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms