RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 UBL4AP11441 157 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 COX6A1P12074 109 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 CELP19835 753 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 NOVA1P51513 510 aaKnown RBP11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 BDH1Q02338 343 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 RIN1Q13671 783 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 IL18Q14116 193 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 EFR3AQ14156 821 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 ZNF613Q6PF04 617 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 KIRREL2Q6UWL6 708 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 NDUFAF7Q7L592 441 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 GDF7Q7Z4P5 450 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 NANOGNBQ7Z5D8 188 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 GID4Q8IVV7 300 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 DUSP18Q8NEJ0 188 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 OR4Q3Q8NH05 313 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 SECISBP2Q96T21 854 aaKnown RBP11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 ATF6BQ99941 703 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 TMED9Q9BVK6 235 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 GPR87Q9BY21 358 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 TBL1XR1Q9BZK7 514 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 KCNN2Q9H2S1 579 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 RBFOX1Q9NWB1 397 aaKnown RBP11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 RPS6KB2Q9UBS0 482 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 KLHL21Q9UJP4 597 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 SLC7A7Q9UM01 511 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 CDH10Q9Y6N8 788 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 NSG1A0A0A6YYJ2 146 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 A8MV72 311 aaPredicted RBP11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 C21orf140B9A014 251 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 SOCS6O14544 535 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 HPGDSO60760 199 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 PPM1BO75688 479 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 NTN1O95631 604 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 CH25HO95992 272 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 NGFRP08138 427 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 CEACAM1P13688 526 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 PAICSP22234 425 aaKnown RBP11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 APEX1P27695 318 aaKnown RBP11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 OTX2P32243 289 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 SSPNQ14714 243 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.98□□□□□ -0.498e-6■■□□□ 12.6
SQSTM1-201ENST00000360718 NDUFAF6Q330K2 333 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 ZNF620Q6ZNG0 422 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 NKAIN4Q8IVV8 208 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 ARIH2OSQ8N7S6 290 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 ZFP41Q8N8Y5 198 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 OR4F15Q8NGB8 312 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 GRPEL2Q8TAA5 225 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 SLC22A8Q8TCC7 542 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 DNAJA4Q8WW22 397 aaPredicted RBP11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 SPRYD4Q8WW59 207 aaPredicted RBP11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 TRIM63Q969Q1 353 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 TMEM246Q9BRR3 403 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 HDHD5Q9BXW7 423 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 FAM117AQ9C073 453 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 PCNX3Q9H6A9 2034 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 SMIM30A4D0T7 59 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 STMND1H3BQB6 276 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 DLL1O00548 723 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 TERTO14746 1132 aaKnown RBP11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 ZNF264O43296 627 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 KLF4O43474 513 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 NAGAP17050 411 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 HTR2AP28223 471 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 TIGD3Q6B0B8 471 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 APOOLQ6UXV4 268 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 NRMQ8IXM6 262 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 GATSQ8NAP1 163 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 OR11G2Q8NGC1 345 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 M1APQ8TC57 530 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 ELP5Q8TE02 316 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 RTN4RQ9BZR6 473 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 RANGRFQ9HD47 186 aaPredicted RBP11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 PAQR5Q9NXK6 330 aaPredicted RBP11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 MYOTQ9UBF9 498 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 NOX1Q9Y5S8 564 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 EML6Q6ZMW3 1958 aa11.98□□□□□ -0.49
SQSTM1-201ENST00000360718 FAM240BA0A1B0GVZ2 78 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 A0A1W2PQD3 144 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 NDUFB5O43674 189 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 SCO2O43819 266 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 THY1P04216 161 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 ICAM2P13598 275 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 RBMS1P29558 406 aaKnown RBP11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 DLSTP36957 453 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 GPR4P46093 362 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 CAV3P56539 151 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 GABREP78334 506 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 C6orf183Q5T699 404 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 ZNF322Q6U7Q0 402 aaPredicted RBP11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 CXXC5Q7LFL8 322 aaKnown RBP11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 PPP1R32Q7Z5V6 425 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 TCTE3Q8IZS6 198 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 NACC2Q96BF6 587 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 IMMP1LQ96LU5 166 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 TTYH2Q9BSA4 534 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 TMEM43Q9BTV4 400 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 FN3KQ9H479 309 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 DLL3Q9NYJ7 618 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms