RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 IFI30P13284 250 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 PVRP15151 417 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 NT5EP21589 574 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 SLC2A5P22732 501 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 ATP6V1E1P36543 226 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 GDNFP39905 211 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 TPMTP51580 245 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 UBE2IP63279 158 aaKnown RBP6.68□□□□□ -1.34
CLCN3-202ENST00000360642 TFF2Q03403 129 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 P2RY14Q15391 338 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 RNF151Q2KHN1 245 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 ABLIM2Q6H8Q1 611 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 ZNF613Q6PF04 617 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 SMARCD3Q6STE5 483 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 NR2C2APQ86WQ0 139 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 PATE1Q8WXA2 126 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 BPIFA2Q96DR5 249 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 MRPL38Q96DV4 380 aaKnown RBP6.68□□□□□ -1.34
CLCN3-202ENST00000360642 ZC3HAV1LQ96H79 300 aaKnown RBP6.68□□□□□ -1.34
CLCN3-202ENST00000360642 ZNF426Q9BUY5 554 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 ALG8Q9BVK2 526 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 MED20Q9H944 212 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 POLE3Q9NRF9 147 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 RBMX2Q9Y388 322 aaKnown RBP6.68□□□□□ -1.34
CLCN3-202ENST00000360642 FANCMQ8IYD8 2048 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 SCN2AQ99250 2005 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 A0A0B4J293 547 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 A0A0B4J2E0 115 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 C2orf92A0A1B0GVN3 265 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 A0A1B0GX12 115 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 GXYLT2A0PJZ3 443 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 NKX2-2O95096 273 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 RCBTB2O95199 551 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 KRT8P05787 483 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 FTH1P19P0C7X4 201 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 IL9P15248 144 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 BMP7P18075 431 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 HK1P19367 917 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 SHC2P98077 582 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 FHL1Q13642 323 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 EXOSC7Q15024 291 aaKnown RBP6.68□□□□□ -1.34
CLCN3-202ENST00000360642 TMEM99Q8N816 258 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 FRMD1Q8N878 549 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 Q8N9G6 341 aaPredicted RBP6.68□□□□□ -1.34
CLCN3-202ENST00000360642 SLC37A3Q8NCC5 494 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 OR52L1Q8NGH7 329 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 RNF31Q96EP0 1072 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 SNX18Q96RF0 628 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 TEAD3Q99594 435 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 OR2B2Q9GZK3 357 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 TP63Q9H3D4 680 aaPredicted RBP6.68□□□□□ -1.34
CLCN3-202ENST00000360642 EVA1AQ9H8M9 152 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 B3GAT2Q9NPZ5 323 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 INPP5EQ9NRR6 644 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 POT1Q9NUX5 634 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 TMEM5Q9Y2B1 443 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 HS3ST3A1Q9Y663 406 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 SPACA6W5XKT8 324 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 A0A0J9YY10 115 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 PLPP2O43688 288 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 COQ9O75208 318 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 CSF1P09603 554 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 SLC2A2P11168 524 aaPredicted RBP6.67□□□□□ -1.34
CLCN3-202ENST00000360642 S1PR1P21453 382 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 PAICSP22234 425 aaKnown RBP6.67□□□□□ -1.34
CLCN3-202ENST00000360642 GABRA3P34903 492 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 POU6F2P78424 691 aaPredicted RBP6.67□□□□□ -1.34
CLCN3-202ENST00000360642 MRPS21P82921 87 aaKnown RBP6.67□□□□□ -1.34
CLCN3-202ENST00000360642 HTR4Q13639 388 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 AMZ1Q400G9 498 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 LCN1P1Q5VSP4 162 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 DGAT2L6Q6ZPD8 337 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 Q6ZSR6 202 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 TRILQ7L0X0 811 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 GRAMD2AQ8IUY3 354 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 SFTPA2Q8IWL1 248 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 SLC22A18ASQ8N1D0 253 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 Q8N402 240 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 DUSP18Q8NEJ0 188 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 OR13C2Q8NGS9 318 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 MARS2Q96GW9 593 aaKnown RBP6.67□□□□□ -1.34
CLCN3-202ENST00000360642 ZNF559Q9BR84 538 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 RNF121Q9H920 327 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 TMEM165Q9HC07 324 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 C14orf105Q9NVL8 296 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 HAO2Q9NYQ3 351 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 FLRT3Q9NZU0 649 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 KLK10O43240 276 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 HCRTR1O43613 425 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 CHP2O43745 196 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 RCVRNP35243 200 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 ACAA2P42765 397 aaKnown RBP6.67□□□□□ -1.34
CLCN3-202ENST00000360642 PSG6Q00889 435 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 DLX2Q07687 328 aaPredicted RBP6.67□□□□□ -1.34
CLCN3-202ENST00000360642 UBXN2BQ14CS0 331 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 CSNK1A1LQ8N752 337 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 NLGN4YQ8NFZ3 816 aaPredicted RBP6.67□□□□□ -1.34
CLCN3-202ENST00000360642 ACOT12Q8WYK0 555 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 TMEM43Q9BTV4 400 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 LMF2Q9BU23 707 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms