RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 ENY2Q9NPA8 101 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 CUTCQ9NTM9 273 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 THAP10Q9P2Z0 257 aaPredicted RBP12.69□□□□□ -0.38
VCP-201ENST00000358901 MOKQ9UQ07 419 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 BCORQ6W2J9 1755 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 SCN1AP35498 2009 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 NID1P14543 1247 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 PKLRP30613 574 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 CSNK1A1P48729 337 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 MEP1BQ16820 701 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 ADIPOR2Q86V24 386 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 TMEM99Q8N816 258 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 OR1J4Q8NGS1 313 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 SLC2A12Q8TD20 617 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 OPALINQ96PE5 141 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 CDCA3Q99618 268 aaPredicted RBP12.69□□□□□ -0.38
VCP-201ENST00000358901 VRK1Q99986 396 aaPredicted RBP12.69□□□□□ -0.38
VCP-201ENST00000358901 SGPP1Q9BX95 441 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 ZFP57Q9NU63 452 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 SPHK1Q9NYA1 384 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 TMEFF2Q9UIK5 374 aaPredicted RBP12.69□□□□□ -0.38
VCP-201ENST00000358901 SRPK3Q9UPE1 567 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 CABIN1Q9Y6J0 2220 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 KIAA1551Q9HCM1 1747 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 TNRC6CQ9HCJ0 1690 aaKnown RBP12.68□□□□□ -0.38
VCP-201ENST00000358901 hCG_1807616A0A1W2PRN6 198 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 HRGP04196 525 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 SLC35E2P0CK97 266 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 ELK1P19419 428 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 CD38P28907 300 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 CLDN6P56747 220 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 TNK1Q13470 666 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 GPR176Q14439 515 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 BHLHA9Q7RTU4 235 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 GPR155Q7Z3F1 870 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 SDF2Q99470 211 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 SEC22CQ9BRL7 303 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 CHRDQ9H2X0 955 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 HRH4Q9H3N8 390 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 AKIP1Q9NQ31 210 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 FAM86C1Q9NVL1 165 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 GLS2Q9UI32 602 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 LCMT2O60294 686 aaKnown RBP12.68□□□□□ -0.38
VCP-201ENST00000358901 YPEL5P62699 121 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 ASAH1Q13510 395 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 USP51Q70EK9 711 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 BTLAQ7Z6A9 289 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 C19orf47Q8N9M1 422 aaKnown RBP12.68□□□□□ -0.38
VCP-201ENST00000358901 SENP5Q96HI0 755 aaPredicted RBP12.68□□□□□ -0.38
VCP-201ENST00000358901 ZNF285Q96NJ3 590 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 KCNJ16Q9NPI9 418 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 NDUFB11Q9NX14 153 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 DHCR7Q9UBM7 475 aaKnown RBP12.68□□□□□ -0.38
VCP-201ENST00000358901 NRAPQ86VF7 1730 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 FBXO24O75426 580 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 HTR2CP28335 458 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 TSFMP43897 325 aaKnown RBP12.68□□□□□ -0.38
VCP-201ENST00000358901 CCR9P51686 369 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 PYCR3Q53H96 274 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 DPY19L2P2Q6ZN68 376 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 ZNF620Q6ZNG0 422 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 CREB3L2Q70SY1 520 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 SULF2Q8IWU5 870 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 HMGCLL1Q8TB92 370 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 SLC35A4Q96G79 324 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 NICN1Q9BSH3 213 aa12.68□□□□□ -0.38
VCP-201ENST00000358901 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.68□□□□□ -0.38
VCP-201ENST00000358901 CHRM4P08173 479 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 S100A12P80511 92 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 AKR1C8PQ5T2L2 129 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 VASH1Q7L8A9 365 aaPredicted RBP12.67□□□□□ -0.38
VCP-201ENST00000358901 ZNF679Q8IYX0 411 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 CCDC71LQ8N9Z2 235 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 OR1E3Q8WZA6 343 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 SELENOIQ9C0D9 397 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 DAPP1Q9UN19 280 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 CHST2Q9Y4C5 530 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 ANKRD33BA6NCL7 494 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 SELENOFO60613 162 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 DPM1O60762 260 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 ZNF254O75437 659 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 SRMP19623 302 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 SERPINA2P20848 420 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 RPS15P62841 145 aaKnown RBP12.67□□□□□ -0.38
VCP-201ENST00000358901 ESPNLQ6ZVH7 1005 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 SYT9Q86SS6 491 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 SMAP2Q8WU79 429 aaPredicted RBP12.67□□□□□ -0.38
VCP-201ENST00000358901 DVL3Q92997 716 aaPredicted RBP12.67□□□□□ -0.38
VCP-201ENST00000358901 SLC41A2Q96JW4 573 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 SORCS2Q96PQ0 1159 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 MAP3K3Q99759 626 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 ULBP3Q9BZM4 244 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 STRADBQ9C0K7 418 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 WDR76Q9H967 626 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 UNKLQ9H9P5 680 aaKnown RBP12.67□□□□□ -0.38
VCP-201ENST00000358901 RPS10P5Q9NQ39 176 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 DUSP22Q9NRW4 184 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 NCDNQ9UBB6 729 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 SCN7AQ01118 1682 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 SMCO3A2RU48 225 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms