RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 IGSF8Q969P0 613 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 PLEK2Q9NYT0 353 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 STEAP1Q9UHE8 339 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 SLCO3A1Q9UIG8 710 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 NPFFR2Q9Y5X5 522 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 FAM171A2A8MVW0 826 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 FAM72CH0Y354 149 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 FUCA1P04066 466 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 THBS1P07996 1170 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 SNRPBP14678 240 aaKnown RBP11.96□□□□□ -0.49
SMC4-202ENST00000357388 POU3F2P20265 443 aaPredicted RBP11.96□□□□□ -0.49
SMC4-202ENST00000357388 HOXD13P35453 343 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 VIPR2P41587 438 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 SIRPAP78324 504 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 AKR1C1Q04828 323 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 DMWDQ09019 674 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 FAM72AQ5TYM5 149 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 FAM72DQ6L9T8 149 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 CGB2Q6NT52 195 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 FAM72BQ86X60 149 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 OR8J2Q8NGG1 315 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 CD200R1Q8TD46 325 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 JTBO76095 146 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 PAPLNO95428 1278 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 CBR1P16152 277 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 PTGER4P35408 488 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 MC3RP41968 323 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 FAM189BP81408 668 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 SLC7A9P82251 487 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 COL9A3Q14050 684 aaPredicted RBP11.96□□□□□ -0.49
SMC4-202ENST00000357388 OXA1LQ15070 435 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 STK11Q15831 433 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 FAM74A1Q5RGS3 127 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 SGPP1Q9BX95 441 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 ALOXE3Q9BYJ1 711 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 OPA3Q9H6K4 179 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 SLC35D1Q9NTN3 355 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 SLC23A2Q9UGH3 650 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 KIDINS220Q9ULH0 1771 aa11.96□□□□□ -0.49
SMC4-202ENST00000357388 ARSDP51689 593 aa11.96□□□□□ -0.5
SMC4-202ENST00000357388 KIAA1024LP59773 190 aa11.96□□□□□ -0.5
SMC4-202ENST00000357388 EEF1A2Q05639 463 aaKnown RBP11.96□□□□□ -0.5
SMC4-202ENST00000357388 IAH1Q2TAA2 248 aaPredicted RBP11.96□□□□□ -0.5
SMC4-202ENST00000357388 ENTPD8Q5MY95 495 aa11.96□□□□□ -0.5
SMC4-202ENST00000357388 SIGLECL1Q8N7X8 197 aa11.96□□□□□ -0.5
SMC4-202ENST00000357388 KHSRPQ92945 711 aaKnown RBP eCLIP11.96□□□□□ -0.54e-7■■■■■ 32.8
SMC4-202ENST00000357388 GNPNAT1Q96EK6 184 aaPredicted RBP11.96□□□□□ -0.5
SMC4-202ENST00000357388 OR5B2Q96R09 309 aa11.96□□□□□ -0.5
SMC4-202ENST00000357388 ENKD1Q9H0I2 346 aa11.96□□□□□ -0.5
SMC4-202ENST00000357388 C1orf198Q9H425 327 aa11.96□□□□□ -0.5
SMC4-202ENST00000357388 BOKQ9UMX3 212 aaPredicted RBP11.96□□□□□ -0.5
SMC4-202ENST00000357388 SULT2B1O00204 365 aa11.96□□□□□ -0.5
SMC4-202ENST00000357388 IGHG1P01857 330 aa11.96□□□□□ -0.5
SMC4-202ENST00000357388 RAF1P04049 648 aa11.96□□□□□ -0.5
SMC4-202ENST00000357388 ICAM2P13598 275 aa11.96□□□□□ -0.5
SMC4-202ENST00000357388 ACKR3P25106 362 aa11.96□□□□□ -0.5
SMC4-202ENST00000357388 ZNF133P52736 654 aaPredicted RBP11.96□□□□□ -0.5
SMC4-202ENST00000357388 CDC20Q12834 499 aa11.96□□□□□ -0.5
SMC4-202ENST00000357388 SHEQ5VZ18 495 aa11.96□□□□□ -0.5
SMC4-202ENST00000357388 IL20RBQ6UXL0 311 aa11.96□□□□□ -0.5
SMC4-202ENST00000357388 RBMXL3Q8N7X1 1067 aaKnown RBP11.96□□□□□ -0.5
SMC4-202ENST00000357388 TMEM102Q8N9M5 508 aaPredicted RBP11.96□□□□□ -0.5
SMC4-202ENST00000357388 ABHD4Q8TB40 342 aa11.96□□□□□ -0.5
SMC4-202ENST00000357388 UCN3Q969E3 161 aa11.96□□□□□ -0.5
SMC4-202ENST00000357388 ACSS1Q9NUB1 689 aaPredicted RBP11.96□□□□□ -0.5
SMC4-202ENST00000357388 OR6C68A6NDL8 312 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 TRABD2BA6NFA1 517 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 YY2O15391 372 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 HCRTO43612 131 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 RRADP55042 308 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 ILKQ13418 452 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 MBTPS1Q14703 1052 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 KCTD11Q693B1 232 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 MAMDC4Q6UXC1 1216 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 RANBP10Q6VN20 620 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 CNTN4Q8IWV2 1026 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 OR4A16Q8NH70 328 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 SEC22AQ96IW7 307 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 CLSTN3Q9BQT9 956 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 RAB22AQ9UL26 194 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 NCR1O76036 304 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 AHRP35869 848 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 RUNX2Q13950 521 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 ENDOGQ14249 297 aaKnown RBP11.95□□□□□ -0.5
SMC4-202ENST00000357388 ADPRMQ3LIE5 342 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 OR4F15Q8NGB8 312 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 SLC35B4Q969S0 331 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 SCPEP1Q9HB40 452 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 MCRIP1C9JLW8 97 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 DBHP09172 617 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 ZXDBP98169 803 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 SLC22A24Q8N4F4 322 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 NHLRC2Q8NBF2 726 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 SLC24A4Q8NFF2 622 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 OR1J2Q8NGS2 313 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 IL1F10Q8WWZ1 152 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 ISL2Q96A47 359 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 APOOQ9BUR5 198 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 LYRM2Q9NU23 88 aaPredicted RBP11.95□□□□□ -0.5
SMC4-202ENST00000357388 C7orf72A4D263 438 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms