RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 EXOGQ9Y2C4 368 aaKnown RBP6.28□□□□□ -1.4
RTN4-203ENST00000357376 NLRC5Q86WI3 1866 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 NAP1L6A6NFF2 107 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 C17orf105B2RV13 164 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 GPRIN2O60269 458 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 RGS11O94810 467 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 APBB3O95704 486 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 TBX6O95947 436 aaPredicted RBP6.28□□□□□ -1.4
RTN4-203ENST00000357376 TP53P04637 393 aaPredicted RBP6.28□□□□□ -1.4
RTN4-203ENST00000357376 GP1BBP13224 206 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 ZNF35P13682 527 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 POU3F3P20264 500 aaPredicted RBP6.28□□□□□ -1.4
RTN4-203ENST00000357376 S1PR1P21453 382 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 CDK2P24941 298 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 SORDQ00796 357 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 SMAD2Q15796 467 aaKnown RBP6.28□□□□□ -1.4
RTN4-203ENST00000357376 CDNFQ49AH0 187 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 RNLSQ5VYX0 342 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 GLT8D1Q68CQ7 371 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 KIRREL2Q6UWL6 708 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 SSX6Q7RTT6 188 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 TMPRSS9Q7Z410 1059 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 PDZD9Q8IXQ8 264 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 ETFBKMTQ8IXQ9 262 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 INO80EQ8NBZ0 244 aaPredicted RBP6.28□□□□□ -1.4
RTN4-203ENST00000357376 OR52B4Q8NGK2 314 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 POTEKPQ9BYX7 375 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 GDE1Q9NZC3 331 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 LRIT1Q9P2V4 623 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 PRODH2Q9UF12 536 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 SLC22A7Q9Y694 548 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 CASP8AP2Q9UKL3 1982 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 SCN2AQ99250 2005 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 RHPN2P1A8MT19 583 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 F5H0A9 414 aaPredicted RBP6.28□□□□□ -1.4
RTN4-203ENST00000357376 DNAJB6O75190 326 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 SC5DO75845 299 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 EPPINO95925 133 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 SPI1P17947 270 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 NFYAP23511 347 aaPredicted RBP6.28□□□□□ -1.4
RTN4-203ENST00000357376 DLX5P56178 289 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 SLC25A30Q5SVS4 291 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 OR5M10Q6IEU7 315 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 RAB12Q6IQ22 244 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 NUP54Q7Z3B4 507 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 OR11H7Q8NGC8 314 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 LMX1AQ8TE12 382 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 APOBEC4Q8WW27 367 aaKnown RBP6.28□□□□□ -1.4
RTN4-203ENST00000357376 FAM46BQ96A09 425 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 KLHL15Q96M94 604 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 DPYSL5Q9BPU6 564 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 GSX2Q9BZM3 304 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 SLC6A15Q9H2J7 730 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 NARFLQ9H6Q4 476 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 ADGRL4Q9HBW9 690 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 HRASLSQ9HDD0 168 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 ZNF346Q9UL40 294 aaKnown RBP6.28□□□□□ -1.4
RTN4-203ENST00000357376 TMEM14AQ9Y6G1 99 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 IFITM5A6NNB3 132 aa6.27□□□□□ -1.4
RTN4-203ENST00000357376 EEF1E1-BLOC1S5C9J1V9 151 aa6.27□□□□□ -1.4
RTN4-203ENST00000357376 PLPP2O43688 288 aa6.27□□□□□ -1.4
RTN4-203ENST00000357376 AHSA1O95433 338 aa6.27□□□□□ -1.4
RTN4-203ENST00000357376 RAB3DO95716 219 aa6.27□□□□□ -1.4
RTN4-203ENST00000357376 EML2O95834 649 aa6.27□□□□□ -1.4
RTN4-203ENST00000357376 IGHA1P01876 353 aa6.27□□□□□ -1.4
RTN4-203ENST00000357376 UBL4AP11441 157 aa6.27□□□□□ -1.4
RTN4-203ENST00000357376 APEHP13798 732 aaKnown RBP6.27□□□□□ -1.4
RTN4-203ENST00000357376 KCNAB1Q14722 419 aa6.27□□□□□ -1.4
RTN4-203ENST00000357376 Q499Y3 187 aa6.27□□□□□ -1.4
RTN4-203ENST00000357376 FAM209AQ5JX71 171 aa6.27□□□□□ -1.4
RTN4-203ENST00000357376 SIGIRRQ6IA17 410 aa6.27□□□□□ -1.4
RTN4-203ENST00000357376 FBXO42Q6P3S6 717 aa6.27□□□□□ -1.4
RTN4-203ENST00000357376 USP53Q70EK8 1073 aa6.27□□□□□ -1.4
RTN4-203ENST00000357376 ZAR1Q86SH2 424 aa6.27□□□□□ -1.4
RTN4-203ENST00000357376 CD163Q86VB7 1156 aa6.27□□□□□ -1.4
RTN4-203ENST00000357376 ZNF584Q8IVC4 421 aa6.27□□□□□ -1.4
RTN4-203ENST00000357376 MCATQ8IVS2 390 aaKnown RBP6.27□□□□□ -1.4
RTN4-203ENST00000357376 RFLNBQ8N5W9 214 aa6.27□□□□□ -1.4
RTN4-203ENST00000357376 HHIPL1Q96JK4 782 aa6.27□□□□□ -1.4
RTN4-203ENST00000357376 INTS14Q96SY0 518 aa6.27□□□□□ -1.4
RTN4-203ENST00000357376 ZNF350Q9GZX5 532 aa6.27□□□□□ -1.4
RTN4-203ENST00000357376 PLEKHA1Q9HB21 404 aa6.27□□□□□ -1.4
RTN4-203ENST00000357376 SERINC4A6NH21 518 aa6.27□□□□□ -1.41
RTN4-203ENST00000357376 B8ZZF3 427 aa6.27□□□□□ -1.41
RTN4-203ENST00000357376 SLC16A7O60669 478 aa6.27□□□□□ -1.41
RTN4-203ENST00000357376 THEGLP0DJG4 465 aa6.27□□□□□ -1.41
RTN4-203ENST00000357376 BLKP51451 505 aa6.27□□□□□ -1.41
RTN4-203ENST00000357376 RAP2BP61225 183 aa6.27□□□□□ -1.41
RTN4-203ENST00000357376 SPOCK1Q08629 439 aa6.27□□□□□ -1.41
RTN4-203ENST00000357376 FGL2Q14314 439 aa6.27□□□□□ -1.41
RTN4-203ENST00000357376 TOMM20Q15388 145 aa6.27□□□□□ -1.41
RTN4-203ENST00000357376 MRM1Q6IN84 353 aaKnown RBP6.27□□□□□ -1.41
RTN4-203ENST00000357376 PARM1Q6UWI2 310 aa6.27□□□□□ -1.41
RTN4-203ENST00000357376 WDR88Q6ZMY6 472 aa6.27□□□□□ -1.41
RTN4-203ENST00000357376 GLB1L2Q8IW92 636 aa6.27□□□□□ -1.41
RTN4-203ENST00000357376 CCDC36Q8IYA8 594 aa6.27□□□□□ -1.41
RTN4-203ENST00000357376 OR6V1Q8N148 313 aa6.27□□□□□ -1.41
RTN4-203ENST00000357376 CRIPAKQ8N1N5 446 aa6.27□□□□□ -1.41
RTN4-203ENST00000357376 OR2L13Q8N349 312 aa6.27□□□□□ -1.41
RTN4-203ENST00000357376 C9orf62Q8N4C0 152 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms