RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 WDR26Q9H7D7 661 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 PRDM7Q9NQW5 492 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 MED17Q9NVC6 651 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 DMRT1Q9Y5R6 373 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 ATG2BQ96BY7 2078 aa7.59□□□□□ -1.2
CDC42SE1-201ENST00000357235 A0A1B0GVT2 93 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 SMAD9O15198 467 aaKnown RBP7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 RAD1O60671 282 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 FMO6PO60774 539 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 RPP14O95059 124 aaKnown RBP7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 EPXP11678 715 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 EDNRAP25101 427 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 PCP4P48539 62 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 RAB28P51157 221 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 FXYD6P3P58550 94 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 ACTR1AP61163 376 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 ACSM1Q08AH1 577 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 ARHGAP19Q14CB8 494 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 MLC1Q15049 377 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 OR1Q1Q15612 314 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 MLF2Q15773 248 aaPredicted RBP7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 ODF4Q2M2E3 257 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 HYAL4Q2M3T9 481 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 TRMT12Q53H54 448 aaKnown RBP7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 TMEM255AQ5JRV8 349 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 APOOLQ6UXV4 268 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 ERN2Q76MJ5 926 aaKnown RBP7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 OR2L5Q8NG80 312 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 OR51Q1Q8NH59 317 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 OR56B4Q8NH76 319 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 RXFP4Q8TDU9 374 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 WDR89Q96FK6 387 aaPredicted RBP7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 LURAP1Q96LR2 239 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 LRRC3BQ96PB8 259 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 SYNPO2LQ9H987 977 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 SEBOXQ9HB31 216 aaPredicted RBP7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 MBNL1Q9NR56 388 aaKnown RBP7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZFP57Q9NU63 452 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 CLDND1Q9NY35 253 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 RPS6KB2Q9UBS0 482 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 ADAM29Q9UKF5 820 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 CBY1Q9Y3M2 126 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 KIAA1671Q9BY89 1806 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 TRPM6Q9BX84 2022 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 MYO15AQ9UKN7 3530 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 A0A0G2JK05 382 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 TRAPPC13A5PLN9 417 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 DUXAA6NLW8 204 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 PLPP2O43688 288 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 SUSD5O60279 629 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 PRAMEF2O60811 474 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 LDB3O75112 727 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 ANXA7P20073 488 aaKnown RBP7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 MAT2AP31153 395 aaKnown RBP7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 RAD52P43351 418 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 SPCS3P61009 180 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 UBE2MP61081 183 aaKnown RBP7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 SNRPNP63162 240 aaKnown RBP7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 ECH1Q13011 328 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 HTR4Q13639 388 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 ELAVL3Q14576 367 aaKnown RBP7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 DHRS7BQ6IAN0 325 aaPredicted RBP7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 TMEM64Q6YI46 380 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 BTN2A1Q7KYR7 527 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 RELL2Q8NC24 303 aaPredicted RBP7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 OR52E1Q8NGJ3 308 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 OR52I2Q8NH67 350 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 C1orf216Q8TAB5 229 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 PTCHD1Q96NR3 888 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 SSX3Q99909 188 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 GINS4Q9BRT9 223 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 MTHFD2LQ9H903 347 aaPredicted RBP7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 TREM2Q9NZC2 230 aa7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 APOBEC3BQ9UH17 382 aaKnown RBP7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 RANBP2P49792 3224 aaKnown RBP7.58□□□□□ -1.2
CDC42SE1-201ENST00000357235 TMEM200CA6NKL6 621 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 IDSB3KWA1 339 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 UBE2CO00762 179 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 BHLHE40O14503 412 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 SPDEFO95238 335 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 RLN1P04808 185 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 IL9P15248 144 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 DDX6P26196 483 aaKnown RBP eCLIP7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 HTR2AP28223 471 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 LAP3P28838 519 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 RPL4P36578 427 aaKnown RBP7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 P2RY2P41231 377 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 PSMA6P60900 246 aaKnown RBP7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 SEC61A1P61619 476 aaKnown RBP7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZNF85Q03923 595 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 PDZK1IP1Q13113 114 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 HNRNPA1L2Q32P51 320 aaKnown RBP7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 SLC22A10Q63ZE4 541 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 MFSD12Q6NUT3 480 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 NUDT18Q6ZVK8 323 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 FCRLAQ7L513 359 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 MAMDC2Q7Z304 686 aaPredicted RBP7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 NAA40Q86UY6 237 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 TPRA1Q86W33 373 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 SLITRK4Q8IW52 837 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms