RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 CMTM4Q8IZR5 234 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 Q8N402 240 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 ANKK1Q8NFD2 765 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 FGFBP3Q8TAT2 258 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 CSGALNACT1Q8TDX6 532 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 SERPINI1Q99574 410 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 TEAD3Q99594 435 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 NUAK2Q9H093 628 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 TMEM185BQ9H7F4 350 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 METTL17Q9H7H0 456 aaPredicted RBP5.04□□□□□ -1.6
CD47-201ENST00000355354 ASH2LQ9UBL3 628 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 ST6GALNAC2Q9UJ37 374 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 MID2Q9UJV3 735 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 IGHV5-51A0A0C4DH38 117 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 TMEM72A0PK05 275 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 PCP4L1A6NKN8 68 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 SURF4O15260 269 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 LILRA1O75019 489 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 RPP14O95059 124 aaKnown RBP5.03□□□□□ -1.6
CD47-201ENST00000355354 LGI1O95970 557 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 ZNF33AQ06730 810 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 SNAPC1Q16533 368 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 HLA-BQ31612 363 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 LRRC37A5PQ49AS3 106 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 ABHD17CQ6PCB6 329 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 LRRN1Q6UXK5 716 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 ADAMTSL2Q86TH1 951 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 DEFB124Q8NES8 71 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 OR52N2Q8NGI0 321 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 OR5M3Q8NGP4 307 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 OR51F2Q8NH61 342 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 RBM4BQ9BQ04 359 aaKnown RBP5.03□□□□□ -1.6
CD47-201ENST00000355354 RBM4Q9BWF3 364 aaKnown RBP5.03□□□□□ -1.6
CD47-201ENST00000355354 SCRT1Q9BWW7 348 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 TINAGL1Q9GZM7 467 aaPredicted RBP5.03□□□□□ -1.6
CD47-201ENST00000355354 VCX3BQ9H321 246 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 VCX3AQ9NNX9 186 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 MRPL22Q9NWU5 206 aaKnown RBP5.03□□□□□ -1.6
CD47-201ENST00000355354 IL20Q9NYY1 176 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 FRAS1Q86XX4 4008 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 TCRBV21S2A2A0A5A6 115 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 CYR61O00622 381 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 DYRK3O43781 588 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 SLC43A1O75387 559 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 DBHP09172 617 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 POLR2CP19387 275 aaPredicted RBP5.03□□□□□ -1.6
CD47-201ENST00000355354 CSTF2P33240 577 aaKnown RBP eCLIP5.03□□□□□ -1.6
CD47-201ENST00000355354 MAZP56270 477 aaKnown RBP5.03□□□□□ -1.6
CD47-201ENST00000355354 ZNF763Q0D2J5 394 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 GPR18Q14330 331 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 COL28A1Q2UY09 1125 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 ARHGAP15Q53QZ3 475 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 METRNLQ641Q3 311 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 C1orf94Q6P1W5 598 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 CHST9Q7L1S5 443 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 TMPRSS12Q86WS5 348 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 OR56A1Q8NGH5 318 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 FERD3LQ96RJ6 166 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 MARVELD1Q9BSK0 173 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 ITPAQ9BY32 194 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 PTGES2Q9H7Z7 377 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 FAM96BQ9Y3D0 163 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 DHFRP00374 187 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 TSPAN19P0C672 248 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 ZNF888P0CJ79 500 aaPredicted RBP5.03□□□□□ -1.6
CD47-201ENST00000355354 NDUFS1P28331 727 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 CSNK1EP49674 416 aaKnown RBP5.03□□□□□ -1.6
CD47-201ENST00000355354 ATP4BP51164 291 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 AP2S1P53680 142 aaPredicted RBP5.03□□□□□ -1.6
CD47-201ENST00000355354 CDK3Q00526 305 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 LPAL2Q16609 132 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 FAM46CQ5VWP2 391 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 TRIM40Q6P9F5 258 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 USP53Q70EK8 1073 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 DPY19L4Q7Z388 723 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 PRSS35Q8N3Z0 413 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 LNX2Q8N448 690 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 OR4A4PQ8NGN8 299 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 C8orf44Q96CB5 159 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 SCMH1Q96GD3 660 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 OR7D2Q96RA2 312 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 DPCDQ9BVM2 203 aaPredicted RBP5.03□□□□□ -1.6
CD47-201ENST00000355354 TMPRSS13Q9BYE2 586 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 BARX1Q9HBU1 254 aaPredicted RBP5.03□□□□□ -1.6
CD47-201ENST00000355354 NDUFB11Q9NX14 153 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 MED29Q9NX70 200 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 TRPC4Q9UBN4 977 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 UPK3AO75631 287 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 ANXA5P08758 320 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 EPHA8P29322 1005 aaPredicted RBP5.03□□□□□ -1.6
CD47-201ENST00000355354 MAPK9P45984 424 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 PCYT1AP49585 367 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 PRKXP51817 358 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 TSPO2Q5TGU0 170 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 SLX4IPQ5VYV7 408 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 MS4A15Q8N5U1 240 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 SAMD12Q8N8I0 201 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 OR5D18Q8NGL1 313 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms