RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 TP53BP1Q12888 1972 aaPredicted RBP19.85■□□□□ 0.77
SHMT1-202ENST00000352886 PRR32B1ATL7 298 aa19.85■□□□□ 0.77
SHMT1-202ENST00000352886 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.85■□□□□ 0.77
SHMT1-202ENST00000352886 OR2B3O76000 313 aa19.85■□□□□ 0.77
SHMT1-202ENST00000352886 F13BP05160 661 aa19.85■□□□□ 0.77
SHMT1-202ENST00000352886 SRFP11831 508 aa19.85■□□□□ 0.77
SHMT1-202ENST00000352886 BTCP35070 178 aa19.85■□□□□ 0.77
SHMT1-202ENST00000352886 RORAP35398 523 aa19.85■□□□□ 0.77
SHMT1-202ENST00000352886 RNASE12Q5GAN4 147 aaKnown RBP19.85■□□□□ 0.77
SHMT1-202ENST00000352886 TIGD3Q6B0B8 471 aa19.85■□□□□ 0.77
SHMT1-202ENST00000352886 ESPNLQ6ZVH7 1005 aa19.85■□□□□ 0.77
SHMT1-202ENST00000352886 OVCH1Q7RTY7 1134 aa19.85■□□□□ 0.77
SHMT1-202ENST00000352886 LRRC75AQ8NAA5 344 aa19.85■□□□□ 0.77
SHMT1-202ENST00000352886 ZNF563Q8TA94 476 aa19.85■□□□□ 0.77
SHMT1-202ENST00000352886 LIPHQ8WWY8 451 aa19.85■□□□□ 0.77
SHMT1-202ENST00000352886 ORAI1Q96D31 301 aa19.85■□□□□ 0.77
SHMT1-202ENST00000352886 GAL3ST4Q96RP7 486 aa19.85■□□□□ 0.77
SHMT1-202ENST00000352886 NOX4Q9NPH5 578 aa19.85■□□□□ 0.77
SHMT1-202ENST00000352886 RXFP3Q9NSD7 469 aa19.85■□□□□ 0.77
SHMT1-202ENST00000352886 GMFGO60234 142 aa19.84■□□□□ 0.77
SHMT1-202ENST00000352886 UBL3O95164 117 aa19.84■□□□□ 0.77
SHMT1-202ENST00000352886 IGF2P01344 180 aa19.84■□□□□ 0.77
SHMT1-202ENST00000352886 LTBQ06643 244 aa19.84■□□□□ 0.77
SHMT1-202ENST00000352886 NTRK2Q16620 822 aa19.84■□□□□ 0.77
SHMT1-202ENST00000352886 SLC36A2Q495M3 483 aa19.84■□□□□ 0.77
SHMT1-202ENST00000352886 LCORQ96JN0 433 aaPredicted RBP19.84■□□□□ 0.77
SHMT1-202ENST00000352886 ZFP3Q96NJ6 502 aa19.84■□□□□ 0.77
SHMT1-202ENST00000352886 DHCR7Q9UBM7 475 aaKnown RBP19.84■□□□□ 0.77
SHMT1-202ENST00000352886 RHPN2P1A8MT19 583 aa19.84■□□□□ 0.77
SHMT1-202ENST00000352886 GPRIN2O60269 458 aa19.84■□□□□ 0.77
SHMT1-202ENST00000352886 CD3GP09693 182 aa19.84■□□□□ 0.77
SHMT1-202ENST00000352886 ASAH2BP0C7U1 165 aa19.84■□□□□ 0.77
SHMT1-202ENST00000352886 SDHAP31040 664 aa19.84■□□□□ 0.77
SHMT1-202ENST00000352886 NANOS3P60323 173 aaKnown RBP19.84■□□□□ 0.77
SHMT1-202ENST00000352886 EFR3AQ14156 821 aa19.84■□□□□ 0.77
SHMT1-202ENST00000352886 BICRALQ6AI39 1079 aa19.84■□□□□ 0.77
SHMT1-202ENST00000352886 KTI12Q96EK9 354 aaPredicted RBP19.84■□□□□ 0.77
SHMT1-202ENST00000352886 LPAR4Q99677 370 aa19.84■□□□□ 0.77
SHMT1-202ENST00000352886 MFRPQ9BY79 579 aa19.84■□□□□ 0.77
SHMT1-202ENST00000352886 NDEL1Q9GZM8 345 aa19.84■□□□□ 0.77
SHMT1-202ENST00000352886 CHRNA10Q9GZZ6 450 aa19.84■□□□□ 0.77
SHMT1-202ENST00000352886 ING3Q9NXR8 418 aa19.84■□□□□ 0.77
SHMT1-202ENST00000352886 CA14Q9ULX7 337 aa19.84■□□□□ 0.77
SHMT1-202ENST00000352886 MMACHCQ9Y4U1 282 aa19.84■□□□□ 0.77
SHMT1-202ENST00000352886 SPAG17Q6Q759 2223 aa19.84■□□□□ 0.77
SHMT1-202ENST00000352886 RP1P56715 2156 aa19.83■□□□□ 0.77
SHMT1-202ENST00000352886 FRG2CA6NGY1 282 aa19.83■□□□□ 0.77
SHMT1-202ENST00000352886 ACOD1A6NK06 481 aa19.83■□□□□ 0.77
SHMT1-202ENST00000352886 ZNF879B4DU55 563 aa19.83■□□□□ 0.77
SHMT1-202ENST00000352886 SRMP19623 302 aa19.83■□□□□ 0.77
SHMT1-202ENST00000352886 PRAMEF17Q5VTA0 474 aa19.83■□□□□ 0.77
SHMT1-202ENST00000352886 UNQ9370/PRO34162Q6UXP9 181 aa19.83■□□□□ 0.77
SHMT1-202ENST00000352886 ZNF671Q8TAW3 534 aa19.83■□□□□ 0.77
SHMT1-202ENST00000352886 YIPF5Q969M3 257 aa19.83■□□□□ 0.77
SHMT1-202ENST00000352886 SPATA2Q9UM82 520 aa19.83■□□□□ 0.77
SHMT1-202ENST00000352886 ABCA7Q8IZY2 2146 aa19.83■□□□□ 0.77
SHMT1-202ENST00000352886 PIN1P1O15428 100 aa19.83■□□□□ 0.76
SHMT1-202ENST00000352886 ICOSLGO75144 302 aa19.83■□□□□ 0.76
SHMT1-202ENST00000352886 IGFBP4P22692 258 aa19.83■□□□□ 0.76
SHMT1-202ENST00000352886 TACR3P29371 465 aa19.83■□□□□ 0.76
SHMT1-202ENST00000352886 DGCR2P98153 550 aa19.83■□□□□ 0.76
SHMT1-202ENST00000352886 C14orf28Q4W4Y0 310 aa19.83■□□□□ 0.76
SHMT1-202ENST00000352886 HACD4Q5VWC8 232 aa19.83■□□□□ 0.76
SHMT1-202ENST00000352886 TOMM5Q8N4H5 51 aa19.83■□□□□ 0.76
SHMT1-202ENST00000352886 LGALS14Q8TCE9 139 aa19.83■□□□□ 0.76
SHMT1-202ENST00000352886 OIT3Q8WWZ8 545 aa19.83■□□□□ 0.76
SHMT1-202ENST00000352886 HSD17B8Q92506 261 aa19.83■□□□□ 0.76
SHMT1-202ENST00000352886 AKAP1Q92667 903 aaKnown RBP eCLIP19.83■□□□□ 0.76
SHMT1-202ENST00000352886 DERL3Q96Q80 235 aa19.83■□□□□ 0.76
SHMT1-202ENST00000352886 RTN4RQ9BZR6 473 aa19.83■□□□□ 0.76
SHMT1-202ENST00000352886 NRSN2Q9GZP1 204 aa19.83■□□□□ 0.76
SHMT1-202ENST00000352886 UCKL1Q9NWZ5 548 aa19.83■□□□□ 0.76
SHMT1-202ENST00000352886 CDC14CA4D256 554 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 LMO7DNF2Z398 122 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 H3BMH7 237 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 ZFPL1O95159 310 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 IGKV3-11P04433 115 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 APEHP13798 732 aaKnown RBP19.82■□□□□ 0.76
SHMT1-202ENST00000352886 UQCRC1P31930 480 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 MAGEB1P43366 347 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 MMP15P51511 669 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 SLC25A1P53007 311 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 BTG1P62324 171 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 PITPNAQ00169 270 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 RPL18Q07020 188 aaKnown RBP19.82■□□□□ 0.76
SHMT1-202ENST00000352886 Q5BKY6 102 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 ZNF684Q5T5D7 378 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 RPS4Y2Q8TD47 263 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 HAVCR2Q8TDQ0 301 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 ZNF721Q8TF20 911 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 ADIPOR1Q96A54 375 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 SLC25A18Q9H1K4 315 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 ZNF281Q9Y2X9 895 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 SLC6A5Q9Y345 797 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 IGKV3D-11A0A0A0MRZ8 115 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 TMEM72A0PK05 275 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 DDAH2O95865 285 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 ERP29P30040 261 aaKnown RBP19.82■□□□□ 0.76
SHMT1-202ENST00000352886 HNRNPKP61978 463 aaKnown RBP eCLIP19.82■□□□□ 0.76
SHMT1-202ENST00000352886 FAPQ12884 760 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms