RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 NXF5Q9H1B4 397 aaKnown RBP8.73□□□□□ -1.01
MRPL55-204ENST00000348259 ALKBH4Q9NXW9 302 aa8.73□□□□□ -1.01
MRPL55-204ENST00000348259 NDUFA13Q9P0J0 144 aa8.73□□□□□ -1.01
MRPL55-204ENST00000348259 BLOC1S6Q9UL45 172 aa8.73□□□□□ -1.01
MRPL55-204ENST00000348259 BOKQ9UMX3 212 aaPredicted RBP8.73□□□□□ -1.01
MRPL55-204ENST00000348259 CR1P17927 2039 aa8.73□□□□□ -1.01
MRPL55-204ENST00000348259 DPPA5A6NC42 116 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 CPSF4LA6NMK7 179 aaKnown RBP8.72□□□□□ -1.01
MRPL55-204ENST00000348259 ZAR1LA6NP61 321 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 DEFB108AA8MXU0 73 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 KLF4O43474 513 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 FRS3O43559 492 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 TSPAN2O60636 221 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 ABCB7O75027 752 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 LYPD3O95274 346 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 THY1P04216 161 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 TFAP2AP05549 437 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 CRHBPP24387 322 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 FPR3P25089 353 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 CTSSP25774 331 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 LOXP28300 417 aaPredicted RBP8.72□□□□□ -1.01
MRPL55-204ENST00000348259 PCSK6P29122 969 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 EPHA2P29317 976 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 RBM34P42696 430 aaKnown RBP8.72□□□□□ -1.01
MRPL55-204ENST00000348259 GSSP48637 474 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 PCYT1AP49585 367 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 GTF2A1P52655 376 aaPredicted RBP8.72□□□□□ -1.01
MRPL55-204ENST00000348259 TPD52P55327 224 aaPredicted RBP8.72□□□□□ -1.01
MRPL55-204ENST00000348259 TSPAN31Q12999 210 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 MAD2L1BPQ15013 274 aaPredicted RBP8.72□□□□□ -1.01
MRPL55-204ENST00000348259 PTGES3Q15185 160 aaKnown RBP8.72□□□□□ -1.01
MRPL55-204ENST00000348259 OR1Q1Q15612 314 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 NTRK2Q16620 822 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 PRAMEF20Q5VT98 475 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 LAIR2Q6ISS4 152 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 LINC00114Q6XXX2 140 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 CLDN22Q8N7P3 220 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 C9orf106Q8NAJ2 232 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 OR10G3Q8NGC4 313 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 RHOXF1Q8NHV9 184 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 TRUB1Q8WWH5 349 aaKnown RBP8.72□□□□□ -1.01
MRPL55-204ENST00000348259 CNOT9Q92600 299 aaKnown RBP8.72□□□□□ -1.01
MRPL55-204ENST00000348259 LRRC46Q96FV0 321 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 WDYHV1Q96HA8 205 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 MPP4Q96JB8 637 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 PRSS27Q9BQR3 290 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 ZNF426Q9BUY5 554 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 TMEM27Q9HBJ8 222 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 KRCC1Q9NPI7 259 aaPredicted RBP8.72□□□□□ -1.01
MRPL55-204ENST00000348259 PLCXD1Q9NUJ7 323 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 CNIH4Q9P003 139 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 NPFFR2Q9Y5X5 522 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 SVEP1Q4LDE5 3571 aa8.72□□□□□ -1.01
MRPL55-204ENST00000348259 NPIPA5A0A0B4J1W7 369 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 A0A0B4J2E0 115 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 SMIM31A0A1B0GVY4 71 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 A0A1B0GX12 115 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 OR6C70A6NIJ9 312 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 NPIPA7E9PJI5 369 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 SCDO00767 359 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 CHP2O43745 196 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 UTS2O95399 124 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 CSTAP01040 98 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 IGF2P01344 180 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 IL2RAP01589 272 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 TP53P04637 393 aaPredicted RBP8.71□□□□□ -1.02
MRPL55-204ENST00000348259 NPIPA8P0DM63 369 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 PRG2P13727 222 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 GABRB1P18505 474 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 CHMP24386 653 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 HTR2AP28223 471 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 KRT20P35900 424 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 OMPP47874 163 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 CTBP2P56545 445 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 NRG3P56975 720 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 CDC42P60953 191 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 SNRPGP62308 76 aaKnown RBP8.71□□□□□ -1.02
MRPL55-204ENST00000348259 IL5RAQ01344 420 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 IL1RL1Q01638 556 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 FOXF2Q12947 444 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 POU4F3Q15319 338 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 CTU2Q2VPK5 515 aaKnown RBP8.71□□□□□ -1.02
MRPL55-204ENST00000348259 SLC25A30Q5SVS4 291 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 SLX4IPQ5VYV7 408 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 ULK3Q6PHR2 472 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 ZNF730Q6ZMV8 503 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 RASSF6Q6ZTQ3 369 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 RRM2BQ7LG56 351 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 DND1Q8IYX4 353 aaKnown RBP8.71□□□□□ -1.02
MRPL55-204ENST00000348259 PIGXQ8TBF5 258 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 DNAJA4Q8WW22 397 aaPredicted RBP8.71□□□□□ -1.02
MRPL55-204ENST00000348259 GTPBP3Q969Y2 492 aaKnown RBP8.71□□□□□ -1.02
MRPL55-204ENST00000348259 Q96MF0 132 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 UCN2Q96RP3 112 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 PRR14Q9BWN1 585 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 DUSP21Q9H596 190 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 EXO5Q9H790 373 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 CALHM2Q9HA72 323 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 GALNT8Q9NY28 637 aa8.71□□□□□ -1.02
MRPL55-204ENST00000348259 SLC7A7Q9UM01 511 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms