RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 WNT11O96014 354 aa13.9□□□□□ -0.18
TSPAN4-201ENST00000346501 CBLP22681 906 aa13.9□□□□□ -0.18
TSPAN4-201ENST00000346501 CLDN17P56750 224 aa13.9□□□□□ -0.18
TSPAN4-201ENST00000346501 LIPEQ05469 1076 aa13.9□□□□□ -0.18
TSPAN4-201ENST00000346501 NCMAPQ5T1S8 102 aa13.9□□□□□ -0.18
TSPAN4-201ENST00000346501 TSPO2Q5TGU0 170 aa13.9□□□□□ -0.18
TSPAN4-201ENST00000346501 HMBOX1Q6NT76 420 aa13.9□□□□□ -0.18
TSPAN4-201ENST00000346501 TMEM108Q6UXF1 575 aa13.9□□□□□ -0.18
TSPAN4-201ENST00000346501 DEF8Q6ZN54 512 aa13.9□□□□□ -0.18
TSPAN4-201ENST00000346501 C22orf34Q6ZV56 151 aa13.9□□□□□ -0.18
TSPAN4-201ENST00000346501 P3H2Q8IVL5 708 aa13.9□□□□□ -0.18
TSPAN4-201ENST00000346501 GPR137CQ8N3F9 429 aa13.9□□□□□ -0.18
TSPAN4-201ENST00000346501 TPD52L3Q96J77 140 aa13.9□□□□□ -0.18
TSPAN4-201ENST00000346501 RADILQ96JH8 1075 aa13.9□□□□□ -0.18
TSPAN4-201ENST00000346501 SLC19A3Q9BZV2 496 aa13.9□□□□□ -0.18
TSPAN4-201ENST00000346501 MGAT4BQ9UQ53 548 aa13.9□□□□□ -0.18
TSPAN4-201ENST00000346501 AMDHD2Q9Y303 409 aa13.9□□□□□ -0.18
TSPAN4-201ENST00000346501 NOX1Q9Y5S8 564 aa13.9□□□□□ -0.18
TSPAN4-201ENST00000346501 IGKV1D-42A0A075B6H8 117 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 LOC102725191A0A1B0GVB3 256 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 TMCC2O75069 709 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 DCTN3O75935 186 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 CDH2P19022 906 aaPredicted RBP13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 DRD4P21917 467 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 EDNRAP25101 427 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 P2RY4P51582 365 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 SLC7A2P52569 658 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 PRPS1P60891 318 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 NPTX1Q15818 432 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 CYBRD1Q53TN4 286 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 C9orf135Q5VTT2 229 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 SLC15A3Q8IY34 581 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 KDM8Q8N371 416 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 PIK3C3Q8NEB9 887 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 OR52N5Q8NH56 324 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 TMEM171Q8WVE6 324 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 SLC41A3Q96GZ6 507 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 MUS81Q96NY9 551 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 LRRC37BQ96QE4 947 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 HS3ST6Q96QI5 342 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 PIP5K1AQ99755 562 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 RSPO3Q9BXY4 272 aaPredicted RBP13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 PCDHAC1Q9H158 963 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 ALG2Q9H553 416 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 MOV10Q9HCE1 1003 aaKnown RBP13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 B3GAT2Q9NPZ5 323 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 NANSQ9NR45 359 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 MRPL39Q9NYK5 338 aaKnown RBP13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 ARL2BPQ9Y2Y0 163 aa13.89□□□□□ -0.19
TSPAN4-201ENST00000346501 ZNF726A6NNF4 738 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 HS3ST1O14792 307 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 TPST2O60704 377 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 OR5F1O95221 314 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 UMPSP11172 480 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 CD53P19397 219 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 AHCYP23526 432 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 PTAFRP25105 342 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 NTF4P34130 210 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 SELENOPP49908 381 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 SH3BGRP55822 239 aaPredicted RBP13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 UBE2NP61088 152 aaKnown RBP13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 SELENOWP63302 87 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 PUDPQ08623 228 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 TESK1Q15569 626 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 GABRA6Q16445 453 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 FKBP9P1Q75LS8 142 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 EPHX4Q8IUS5 362 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 ZIC4Q8N9L1 334 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 OR5J2Q8NH18 312 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 AKAP1Q92667 903 aaKnown RBP eCLIP13.88□□□□□ -0.192e-6■■■□□ 15.5
TSPAN4-201ENST00000346501 FBXW5Q969U6 566 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 HS6ST2Q96MM7 605 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 KCTD14Q9BQ13 255 aaPredicted RBP13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 LINC00470Q9BZP3 86 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 CXXC4Q9H2H0 198 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 CXorf56Q9H5V9 222 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 OBP2BQ9NPH6 170 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 FAIMQ9NVQ4 179 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 CMTM6Q9NX76 183 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 POU2F3Q9UKI9 436 aa13.88□□□□□ -0.19
TSPAN4-201ENST00000346501 A0A1W2PPR1 153 aa13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 CXCR6O00574 342 aa13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 FZD7O75084 574 aa13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 ZNF682O95780 498 aa13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 BGLAPP02818 100 aa13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 ITGA5P08648 1049 aa13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 ADORA3P0DMS8 318 aa13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 THRBP10828 461 aa13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 RBM34P42696 430 aaKnown RBP13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 PSME3P61289 254 aa13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 POU3F1Q03052 451 aaPredicted RBP13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 BSPH1Q075Z2 132 aa13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 ST3GAL3Q11203 375 aa13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 SHEQ5VZ18 495 aa13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 TREML1Q86YW5 311 aa13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 RBM45Q8IUH3 476 aaKnown RBP13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 ZNF611Q8N823 705 aa13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 ANKK1Q8NFD2 765 aa13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 FAM162AQ96A26 154 aa13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 KCNS3Q9BQ31 491 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms