RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 NDRG4Q9ULP0 352 aaKnown RBP10.06□□□□□ -0.8
CLCN6-202ENST00000346436 KNL1Q8NG31 2342 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 SMCO3A2RU48 225 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 LINC01387J3KSC0 135 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 M0QZ24 198 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 ABCD4O14678 606 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 SLC19A2O60779 497 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 PPP1R3DO95685 299 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 NPPBP16860 134 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 AKR1D1P51857 326 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 AKR1C2P52895 323 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 MRPL58Q14197 206 aaKnown RBP10.06□□□□□ -0.8
CLCN6-202ENST00000346436 XKRXQ6PP77 449 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 NDUFAF7Q7L592 441 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 TMED4Q7Z7H5 227 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 CMTM4Q8IZR5 234 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 SCGB1C1Q8TD33 95 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 ARSGQ96EG1 525 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 AIFM2Q9BRQ8 373 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 UGT2A1Q9Y4X1 527 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 SLC22A7Q9Y694 548 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 ARID1BQ8NFD5 2236 aaPredicted RBP10.06□□□□□ -0.8
CLCN6-202ENST00000346436 MRPS14O60783 128 aaKnown RBP10.06□□□□□ -0.8
CLCN6-202ENST00000346436 SULT1C4O75897 302 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 MT-CO2P00403 227 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 AMY2BP19961 511 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 EIF2B1Q14232 305 aaKnown RBP10.06□□□□□ -0.8
CLCN6-202ENST00000346436 TP53I3Q53FA7 332 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 C9orf135Q5VTT2 229 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 PLCXD3Q63HM9 321 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 TECPR1Q7Z6L1 1165 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 PTOV1Q86YD1 416 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 ZNF615Q8N8J6 731 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 ADAMTS16Q8TE57 1224 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 ZNF566Q969W8 418 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 SIRT5Q9NXA8 310 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 COPZ2Q9P299 210 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 SLC5A6Q9Y289 635 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 TP53TG5Q9Y2B4 290 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 ZNF44P15621 663 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 RPS19P39019 145 aaKnown RBP10.06□□□□□ -0.8
CLCN6-202ENST00000346436 CCL7P80098 99 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 TMEM196Q5HYL7 178 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 CPEB2Q7Z5Q1 589 aaKnown RBP10.06□□□□□ -0.8
CLCN6-202ENST00000346436 CMTM1Q8IZ96 169 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 SCCPDHQ8NBX0 429 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 B3GNT2Q9NY97 397 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 TMEFF2Q9UIK5 374 aaPredicted RBP10.06□□□□□ -0.8
CLCN6-202ENST00000346436 SH2D7A6NKC9 451 aaPredicted RBP10.05□□□□□ -0.8
CLCN6-202ENST00000346436 ABHD16AO95870 558 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 SLC35E2P0CK97 266 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 FUT1P19526 365 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 EPHA8P29322 1005 aaPredicted RBP10.05□□□□□ -0.8
CLCN6-202ENST00000346436 GIPRP48546 466 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 GNMTQ14749 295 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 CTF1Q16619 201 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 HSD17B12Q53GQ0 312 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 STPG1Q5TH74 334 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 USP51Q70EK9 711 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 ZMYND19Q96E35 227 aaPredicted RBP10.05□□□□□ -0.8
CLCN6-202ENST00000346436 ALG8Q9BVK2 526 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 FGF22Q9HCT0 170 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 TRIP12Q14669 1992 aaPredicted RBP10.05□□□□□ -0.8
CLCN6-202ENST00000346436 TRBV2A0A0J9YWF9 115 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 SMLR1H3BR10 107 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 H7C417 338 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 PRKYO43930 277 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 PIAS2O75928 621 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 VAMP5O95183 116 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 CBX7O95931 251 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 GABRR1P24046 479 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 EMP3P54852 163 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 B4GALNT1Q00973 533 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 HES5Q5TA89 166 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 ZNF584Q8IVC4 421 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 ZNF321PQ8N8H1 164 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 CCDC71LQ8N9Z2 235 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 MSI2Q96DH6 328 aaKnown RBP10.05□□□□□ -0.8
CLCN6-202ENST00000346436 ZNF845Q96IR2 970 aaPredicted RBP10.05□□□□□ -0.8
CLCN6-202ENST00000346436 CNOT2Q9NZN8 540 aaKnown RBP10.05□□□□□ -0.8
CLCN6-202ENST00000346436 LRRN3E7EW58 273 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 G3V3Y1 287 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 NARSO43776 548 aaKnown RBP10.05□□□□□ -0.8
CLCN6-202ENST00000346436 GABRG2P18507 467 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 APEX1P27695 318 aaKnown RBP10.05□□□□□ -0.8
CLCN6-202ENST00000346436 CD1CP29017 333 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 CLDN17P56750 224 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 POU3F1Q03052 451 aaPredicted RBP10.05□□□□□ -0.8
CLCN6-202ENST00000346436 LTB4RQ15722 352 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 ZNF813Q6ZN06 617 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 Q6ZS52 159 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 NOXA1Q86UR1 476 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 DYNC2LI1Q8TCX1 351 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 FGF11Q92914 225 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 TRAV27A0A087WT01 109 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 H0YIG0 161 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 PET100P0DJ07 73 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 ELAVL4P26378 380 aaKnown RBP10.05□□□□□ -0.8
CLCN6-202ENST00000346436 ILKQ13418 452 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 JMJD6Q6NYC1 403 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms