RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 NKX2-4Q9H2Z4 354 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 LMO7Q8WWI1 1683 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 ADAMTS4O75173 837 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 PFKMP08237 780 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 MMP12P39900 470 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 ZNF140P52738 457 aaPredicted RBP11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 MARCH8Q5T0T0 291 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 SLC6A19Q695T7 634 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 SFXN4Q6P4A7 337 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 FAM122CQ6P4D5 195 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 ARFGAP1Q8N6T3 406 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 SNX11Q9Y5W9 270 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 ZNF33BQ06732 778 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 PLAC9Q5JTB6 97 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 FAM199XQ6PEV8 388 aaPredicted RBP11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 TAS1R1Q7RTX1 841 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 ABHD4Q8TB40 342 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 FAM3CQ92520 227 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 SEMA4GQ9NTN9 838 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 MYOTQ9UBF9 498 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 CLEC2DQ9UHP7 191 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 HTRA3P83110 453 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 TLE4Q04727 773 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 ZNF750Q32MQ0 723 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 CLLU1OSQ5K130 101 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 PRICKLE2Q7Z3G6 844 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 PLPP7Q8NBV4 271 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 ZNF480Q8WV37 535 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 CHST11Q9NPF2 352 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 MTCH1Q9NZJ7 389 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 CLDN24A6NM45 220 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 AQP9O43315 295 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 ACSM1Q08AH1 577 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 PDE7AQ13946 482 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 GPR176Q14439 515 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 CDKN3Q16667 212 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 OR4A16Q8NH70 328 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 C14orf79Q96F83 325 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 NMNAT3Q96T66 252 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 NT5DC2Q9H857 520 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 ARFGEF2Q9Y6D5 1785 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 TMEM235A6NFC5 223 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 AIFM1O95831 613 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 CLEC3BP05452 202 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 OR10J4P0C629 311 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 MSMO1Q15800 293 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 OR5L1Q8NGL2 311 aa11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 SMAP2Q8WU79 429 aaPredicted RBP11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 RBPMSQ93062 196 aaKnown RBP11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 LMF2Q9BU23 707 aaKnown RBP11.3□□□□□ -0.6
SEMA6A-202ENST00000343348 HTR2CP28335 458 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 TMEM64Q6YI46 380 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 OVCH1Q7RTY7 1134 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 UPRTQ96BW1 309 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 RNF170Q96K19 258 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 UBXN10Q96LJ8 280 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 TMEM59Q9BXS4 323 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 HSFX1Q9UBD0 423 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 MRPS28Q9Y2Q9 187 aaKnown RBP11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 SLC31A2O15432 143 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 EFSO43281 561 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 SLC1A3P43003 542 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 INHBCP55103 352 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 SOWAHCQ53LP3 525 aaPredicted RBP11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 ZNF684Q5T5D7 378 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 FAM185AQ8N0U4 392 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 TMEM255BQ8WV15 326 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 DCLRE1CQ96SD1 692 aaKnown RBP11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 LIN7BQ9HAP6 207 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 IFT172Q9UG01 1749 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 CHD2O14647 1828 aaKnown RBP11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 PRSS38A1L453 326 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 OR2T1O43869 369 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 B4GALT3O60512 393 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 NPY4RP50391 375 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 ELLP55199 621 aaPredicted RBP11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 ERVFC1P60507 584 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 TMEM176BQ3YBM2 270 aaPredicted RBP11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 ALG12Q9BV10 488 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 PLK3Q9H4B4 646 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 RNF167Q9H6Y7 350 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 RAB9BQ9NP90 201 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 SETD1AO15047 1707 aaKnown RBP11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 TIMM8AO60220 97 aaPredicted RBP11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 TCRBP04435 133 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 CALCBP10092 127 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 F2RL1P55085 397 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 OR8G2PQ6IF36 304 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 NPSR1Q6W5P4 371 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 SSX9Q7RTT3 188 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 SLC16A14Q7RTX9 510 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 SYT9Q86SS6 491 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 HSD17B11Q8NBQ5 300 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 RHBDD1Q8TEB9 315 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 SLC38A5Q8WUX1 472 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 FGGYQ96C11 551 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 LRFN5Q96NI6 719 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 C17orf112F2Z3M2 114 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 HIST1H1TP22492 207 aaPredicted RBP11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 RGRP47804 291 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms