RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 CHST2Q9Y4C5 530 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 ZNF593O00488 134 aaPredicted RBP6.63□□□□□ -1.35
VCAN-202ENST00000342785 CISD3P0C7P0 127 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 TMEM225BP0DP42 221 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 ST6GAL1P15907 406 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 CASRP41180 1078 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 HSD17B7P56937 341 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 MEP1BQ16820 701 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 MANEAQ5SRI9 462 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 PDSS1Q5T2R2 415 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 KIAA0895LQ68EN5 471 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 C3P1Q6ZMU1 363 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 CFAP77Q6ZQR2 320 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 GLB1L2Q8IW92 636 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 RBM24Q9BX46 236 aaKnown RBP6.63□□□□□ -1.35
VCAN-202ENST00000342785 CEP250Q9BV73 2442 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 DOCK1Q14185 1865 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 PTPN6P29350 595 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 CSNK1EP49674 416 aaKnown RBP6.63□□□□□ -1.35
VCAN-202ENST00000342785 CCR9P51686 369 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 FXNQ16595 210 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 ARL14Q8N4G2 192 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 ZNF565Q8N9K5 539 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 GALNT11Q8NCW6 608 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 LCORQ96JN0 433 aaPredicted RBP6.63□□□□□ -1.35
VCAN-202ENST00000342785 TMEM43Q9BTV4 400 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 SLC6A20Q9NP91 592 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 FGF21Q9NSA1 209 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 DNAJC13O75165 2243 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 BLACEA4D250 179 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 NPIPB8E9PQR5 432 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 HSPA12AO43301 675 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 IGHA2P01877 340 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 PVALBP20472 110 aaPredicted RBP6.63□□□□□ -1.35
VCAN-202ENST00000342785 HTR2AP28223 471 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 ARL6IP1Q15041 203 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 CDKN3Q16667 212 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 TSSK4Q6SA08 328 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 LINC01555Q8NAE3 123 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 STOML3Q8TAV4 291 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 DDIT4LQ96D03 193 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 SEMA6CQ9H3T2 930 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 APC2O95996 2303 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 A0A0A6YYD5 115 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 SMLR1H3BR10 107 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 LIMS3P0CW19 117 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 LIMS4P0CW20 117 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 PET100P0DJ07 73 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 DAP3P51398 398 aaKnown RBP6.63□□□□□ -1.35
VCAN-202ENST00000342785 CD300CQ08708 224 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 CBFBQ13951 182 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 GSG1LQ6UXU4 331 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 ABHD12BQ7Z5M8 362 aaPredicted RBP6.63□□□□□ -1.35
VCAN-202ENST00000342785 OR13C9Q8NGT0 318 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 SMAP2Q8WU79 429 aaPredicted RBP6.63□□□□□ -1.35
VCAN-202ENST00000342785 OR5B2Q96R09 309 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 APMAPQ9HDC9 416 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 KCNN3Q9UGI6 736 aa6.63□□□□□ -1.35
VCAN-202ENST00000342785 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 VEGFCP49767 419 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 DIO1P49895 249 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 SSX1Q16384 188 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 FAM27D1Q5T7N8 215 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 PRSS45Q7RTY3 260 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 CD163Q86VB7 1156 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 FAM109AQ8N4B1 249 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 GIMAP5Q96F15 307 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 ELF4Q99607 663 aaPredicted RBP6.62□□□□□ -1.35
VCAN-202ENST00000342785 PRDM9Q9NQV7 894 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 IL20Q9NYY1 176 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 SERGEFQ9UGK8 458 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 NINQ8N4C6 2090 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 F5H5K5 113 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 SELENOFO60613 162 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 RAD51DO75771 328 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 GLCEO94923 617 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 UTS2O95399 124 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 SRP9P49458 86 aaKnown RBP6.62□□□□□ -1.35
VCAN-202ENST00000342785 BTG1P62324 171 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 AGERQ15109 404 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 CMIPQ8IY22 773 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 GTPBP8Q8N3Z3 284 aaPredicted RBP6.62□□□□□ -1.35
VCAN-202ENST00000342785 BPIFB2Q8N4F0 458 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 BAHD1Q8TBE0 780 aaPredicted RBP6.62□□□□□ -1.35
VCAN-202ENST00000342785 ZFPM2Q8WW38 1151 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 APH1BQ8WW43 257 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 ASB17Q8WXJ9 295 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 SLC46A1Q96NT5 459 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 C6orf106Q9H6K1 298 aaPredicted RBP6.62□□□□□ -1.35
VCAN-202ENST00000342785 ACOXLQ9NUZ1 547 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 RPH3AQ9Y2J0 694 aaPredicted RBP6.62□□□□□ -1.35
VCAN-202ENST00000342785 HIF3AQ9Y2N7 669 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 ZDBF2Q9HCK1 2354 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 TMEM212A6NML5 194 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 SULT2B1O00204 365 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 OR7A10O76100 309 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 KCNK2O95069 426 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 HIST1H1CP16403 213 aaKnown RBP6.62□□□□□ -1.35
VCAN-202ENST00000342785 GZMKP49863 264 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 HCCSP53701 268 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms