RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 OR6N2Q8NGY6 317 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 SMIM4Q8WVI0 70 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 SLC22A18Q96BI1 424 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 SORCS2Q96PQ0 1159 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 TCEAL2Q9H3H9 227 aaPredicted RBP13.19□□□□□ -0.3
CPSF7-201ENST00000340437 V9GY05 133 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 MED12Q93074 2177 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 A0A1B0GVI7 797 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 LYPD3O95274 346 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 OR2T7P0C7T2 308 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 SPI1P17947 270 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 ITPKBP27987 946 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 PRMT2P55345 433 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 HTR4Q13639 388 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 AANATQ16613 207 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 PRICKLE4Q2TBC4 344 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 UBE2NLQ5JXB2 153 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 ZNF676Q8N7Q3 588 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 OR2T27Q8NH04 317 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 SIPA1Q96FS4 1042 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 OR1F2PQ96R84 312 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 LOC100509620A0A075B734 347 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 C11orf98E9PRG8 122 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 SULT1A3P0DMM9 295 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 SULT1A4P0DMN0 295 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 HOXB2P14652 356 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 PTGS2P35354 604 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 PBX2P40425 430 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 BTG2P78543 158 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 OR10AC1Q8NH08 325 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 DIABLOQ9NR28 239 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 DUSP22Q9NRW4 184 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 COPZ2Q9P299 210 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 SCML1Q9UN30 329 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 NUP210Q8TEM1 1887 aaPredicted RBP13.19□□□□□ -0.3
CPSF7-201ENST00000340437 ASXL3Q9C0F0 2248 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 IFITM5A6NNB3 132 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 SIGLEC5O15389 551 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 NUDT14O95848 222 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 PLGP00747 810 aaPredicted RBP13.18□□□□□ -0.3
CPSF7-201ENST00000340437 SLC2A5P22732 501 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 RPS11P62280 158 aaKnown RBP eCLIP13.18□□□□□ -0.3
CPSF7-201ENST00000340437 ACTA2P62736 377 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 ACTG2P63267 376 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 GUCA2AQ02747 115 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 SIGLEC14Q08ET2 396 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 RPL22L1Q6P5R6 122 aaKnown RBP13.18□□□□□ -0.3
CPSF7-201ENST00000340437 PARM1Q6UWI2 310 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 FAM220AQ7Z4H9 259 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 BOLLQ8N9W6 283 aaKnown RBP13.18□□□□□ -0.3
CPSF7-201ENST00000340437 RCBTB1Q8NDN9 531 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 LOC105371267A0A1B0GV96 52 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 PRR32B1ATL7 298 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 KHNYNO15037 678 aaKnown RBP13.18□□□□□ -0.3
CPSF7-201ENST00000340437 CTXN1P60606 82 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 PCGF3Q3KNV8 242 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 PRR22Q8IZ63 422 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 PHOSPHO1Q8TCT1 267 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 ALG12Q9BV10 488 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 MS4A7Q9GZW8 240 aaPredicted RBP13.18□□□□□ -0.3
CPSF7-201ENST00000340437 ARL6Q9H0F7 186 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 SLITRK2Q9H156 845 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 MTIF3Q9H2K0 278 aaKnown RBP13.18□□□□□ -0.3
CPSF7-201ENST00000340437 RXFP3Q9NSD7 469 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 UNC13CQ8NB66 2214 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 ELOA3DA6NLF2 546 aaPredicted RBP13.18□□□□□ -0.3
CPSF7-201ENST00000340437 KLF8O95600 359 aaPredicted RBP13.18□□□□□ -0.3
CPSF7-201ENST00000340437 CELA2BP08218 269 aaPredicted RBP13.18□□□□□ -0.3
CPSF7-201ENST00000340437 LIPCP11150 499 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 GALP22466 123 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 MAOBP27338 520 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 TSFMP43897 325 aaKnown RBP13.18□□□□□ -0.3
CPSF7-201ENST00000340437 GAS6Q14393 721 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 MELKQ14680 651 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 CEBPEQ15744 281 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 ELOA3BQ3SY89 546 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 ELOA3Q8NG57 546 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 FGF14Q92915 247 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 TRIM2Q9C040 744 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 ZMAT3Q9HA38 289 aaKnown RBP13.18□□□□□ -0.3
CPSF7-201ENST00000340437 ZC4H2Q9NQZ6 224 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 ERVK-19Q9WJR5 959 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 MPDZO75970 2070 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 HEATR5AQ86XA9 2040 aa13.18□□□□□ -0.3
CPSF7-201ENST00000340437 CBX7O95931 251 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 MAOAP21397 527 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 ACAA2P42765 397 aaKnown RBP13.17□□□□□ -0.3
CPSF7-201ENST00000340437 ARHGDIBP52566 201 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 PSG6Q00889 435 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 GPR139Q6DWJ6 353 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 FAM198BQ6UWH4 519 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 LRRC69Q6ZNQ3 347 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 OR5M1Q8NGP8 315 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 TNFAIP8L1Q8WVP5 186 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 HERVK_113Q902F9 699 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 DNAJB12Q9NXW2 375 aaKnown RBP13.17□□□□□ -0.3
CPSF7-201ENST00000340437 PCDHGA5Q9Y5G8 931 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 GPR89AB7ZAQ6 455 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 GPR89BP0CG08 455 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 FNTBP49356 437 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms