RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 SNAP29O95721 258 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 MECP2P51608 486 aaKnown RBP11.74□□□□□ -0.53
LIN54-201ENST00000340417 FOXF1Q12946 379 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 MFAP5Q13361 173 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 SELPLGQ14242 412 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 ASCC1Q8N9N2 400 aaKnown RBP11.74□□□□□ -0.53
LIN54-201ENST00000340417 EMC6Q9BV81 110 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 YTHDF1Q9BYJ9 559 aaKnown RBP11.74□□□□□ -0.53
LIN54-201ENST00000340417 NDRG4Q9ULP0 352 aaKnown RBP11.74□□□□□ -0.53
LIN54-201ENST00000340417 GREB1LQ9C091 1923 aaPredicted RBP11.74□□□□□ -0.53
LIN54-201ENST00000340417 LOC100509620A0A075B734 347 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 DHFRP00374 187 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 HSF1Q00613 529 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 SLX4IPQ5VYV7 408 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 OR7E24Q6IFN5 339 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 SFTPA2Q8IWL1 248 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 ASB17Q8WXJ9 295 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 GPR78Q96P69 363 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 HRH3Q9Y5N1 445 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 ANKUB1A6NFN9 424 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 L7N2F9 121 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 ZNF593O00488 134 aaPredicted RBP11.73□□□□□ -0.53
LIN54-201ENST00000340417 ETHE1O95571 254 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 ITGAMP11215 1152 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 BCAP31P51572 246 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 VAMP2P63027 116 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 AGERQ15109 404 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 PGGHGQ32M88 737 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 GDF7Q7Z4P5 450 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 SNX29P2Q8IUI4 249 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 FAM46BQ96A09 425 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 HAVCR1Q96D42 359 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 LIN37Q96GY3 246 aaPredicted RBP11.73□□□□□ -0.53
LIN54-201ENST00000340417 RNF32Q9H0A6 362 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 WDR54Q9H977 334 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 PEX16Q9Y5Y5 336 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 MAP1BP46821 2468 aaKnown RBP11.73□□□□□ -0.53
LIN54-201ENST00000340417 A0A1W2PQ09 198 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 SELEP16581 610 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 YBX1P67809 324 aaKnown RBP11.73□□□□□ -0.53
LIN54-201ENST00000340417 CLN3Q13286 438 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 SSX6Q7RTT6 188 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 FAM181AQ8N9Y4 354 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 SLC7A6OSQ96CW6 309 aaPredicted RBP11.73□□□□□ -0.53
LIN54-201ENST00000340417 DIRAS3O95661 229 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 ZNF791Q3KP31 576 aaPredicted RBP11.73□□□□□ -0.53
LIN54-201ENST00000340417 SYT14P1Q58G82 188 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 PIGGQ5H8A4 983 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 NHSL2Q5HYW2 709 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 LIPKQ5VXJ0 399 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 MDGA2Q7Z553 956 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 HMGCLL1Q8TB92 370 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 GORASP2Q9H8Y8 452 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 H3BNX3 289 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 KLK8O60259 260 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 PAHP00439 452 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 FHL5Q5TD97 284 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 TMEM255BQ8WV15 326 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 FBXO17Q96EF6 278 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 A0A0G2JMZ2 1700 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 LRRC37A2A6NM11 1700 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 CRTAPO75718 401 aaPredicted RBP11.73□□□□□ -0.53
LIN54-201ENST00000340417 ACP2P11117 423 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 AGFG1P52594 562 aaKnown RBP11.73□□□□□ -0.53
LIN54-201ENST00000340417 ZNF322Q6U7Q0 402 aaPredicted RBP11.73□□□□□ -0.53
LIN54-201ENST00000340417 FJX1Q86VR8 437 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 OR51T1Q8NGJ9 327 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 HAVCR2Q8TDQ0 301 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 ASB5Q8WWX0 329 aa11.73□□□□□ -0.53
LIN54-201ENST00000340417 DCLRE1CQ96SD1 692 aaKnown RBP11.73□□□□□ -0.53
LIN54-201ENST00000340417 BARD1Q99728 777 aaKnown RBP11.73□□□□□ -0.53
LIN54-201ENST00000340417 SMIM30A4D0T7 59 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 THBS1P07996 1170 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 RAB11BQ15907 218 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 PRTGQ2VWP7 1150 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 GXYLT1Q4G148 440 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 OR5D14Q8NGL3 314 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 ESRP2Q9H6T0 727 aaKnown RBP11.72□□□□□ -0.53
LIN54-201ENST00000340417 HDGFL3Q9Y3E1 203 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 DNAJB5O75953 348 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 SEC14L2O76054 403 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 CBX7O95931 251 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 IST1P53990 364 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 CXCR4P61073 352 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 SNRPD2P62316 118 aaKnown RBP11.72□□□□□ -0.53
LIN54-201ENST00000340417 ZNF385BQ569K4 471 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.72□□□□□ -0.53
LIN54-201ENST00000340417 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.72□□□□□ -0.53
LIN54-201ENST00000340417 LRRC17Q8N6Y2 441 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 GJC3Q8NFK1 279 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 SLC6A15Q9H2J7 730 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 B3GAT1Q9P2W7 334 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 GM2AP17900 193 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 ACP1P24666 158 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 TSPAN31Q12999 210 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 CNRIP1Q96F85 164 aaPredicted RBP11.72□□□□□ -0.53
LIN54-201ENST00000340417 OXGR1Q96P68 337 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 ZNF175Q9Y473 711 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 MITFO75030 526 aaPredicted RBP11.72□□□□□ -0.53
LIN54-201ENST00000340417 CLIC3O95833 236 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms