RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 CMTM4Q8IZR5 234 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 METTL4Q8N3J2 472 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 PRELID2Q8N945 189 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM102Q8N9M5 508 aaPredicted RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 CHST4Q8NCG5 386 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 OR4E2Q8NGC2 313 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 OR10G2Q8NGC3 310 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 UBALD1Q8TB05 177 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 NUDT8Q8WV74 236 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 HDAC10Q969S8 669 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 TCTN2Q96GX1 697 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 CNTNAP3BQ96NU0 1288 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 EMC7Q9NPA0 242 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 GNG13Q9P2W3 67 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 A0A1W2PQ09 198 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 ARGFXA6NJG6 315 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF736B4DX44 427 aaPredicted RBP3.06□□□□□ -1.92
CSMD3-202ENST00000339701 DSCR3O14972 297 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 TFPTP0C1Z6 253 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 SPATA31C1P0DKV0 1188 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 GP1BBP13224 206 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 BCKDHBP21953 392 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 RAB13P51153 203 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 CLCNKAP51800 687 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 LUMP51884 338 aaPredicted RBP3.06□□□□□ -1.92
CSMD3-202ENST00000339701 EMP2P54851 167 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 ARF3P61204 181 aaPredicted RBP3.06□□□□□ -1.92
CSMD3-202ENST00000339701 ARF1P84077 181 aaKnown RBP3.06□□□□□ -1.92
CSMD3-202ENST00000339701 FCN2Q15485 313 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 SLC35G1Q2M3R5 365 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 SOWAHCQ53LP3 525 aaPredicted RBP3.06□□□□□ -1.92
CSMD3-202ENST00000339701 SLC35D3Q5M8T2 416 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 WIPI1Q5MNZ9 446 aaPredicted RBP3.06□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF613Q6PF04 617 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 TMIGD1Q6UXZ0 262 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 MRPL21Q7Z2W9 205 aaKnown RBP3.06□□□□□ -1.92
CSMD3-202ENST00000339701 LGI4Q8N135 537 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 DCAF4L2Q8NA75 395 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 SYT14Q8NB59 555 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF485Q8NCK3 441 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 ZCCHC10Q8TBK6 192 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 DDIT4LQ96D03 193 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 DNAJC19Q96DA6 116 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 ZC3HAV1LQ96H79 300 aaKnown RBP3.06□□□□□ -1.92
CSMD3-202ENST00000339701 SARGQ9BW04 601 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 MFRPQ9BY79 579 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 SLC5A7Q9GZV3 580 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 IL21RQ9HBE5 538 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 DUSP22Q9NRW4 184 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 FKBP11Q9NYL4 201 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 KLF13Q9Y2Y9 288 aaPredicted RBP3.06□□□□□ -1.92
CSMD3-202ENST00000339701 COL5A1P20908 1838 aaPredicted RBP3.06□□□□□ -1.92
CSMD3-202ENST00000339701 ANKUB1A6NFN9 424 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 SSX5O60225 188 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 LEFTY1O75610 366 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 F3P13726 295 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 CCR7P32248 378 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 GATMP50440 423 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 HCCSP53701 268 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 MAXP61244 160 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 SLC35A2P78381 396 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 CRMP1Q14194 572 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 CSRP2Q16527 193 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 C6orf141Q5SZD1 244 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 CD276Q5ZPR3 534 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM53Q6P2H8 277 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 TRAPPC6BQ86SZ2 158 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 ARHGEF39Q8N4T4 335 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 SLC37A3Q8NCC5 494 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 OR51S1Q8NGJ8 323 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 ISG20Q96AZ6 181 aaKnown RBP3.06□□□□□ -1.92
CSMD3-202ENST00000339701 ATXN7L3BQ96GX2 97 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 MS4A4AQ96JQ5 239 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 COQ10AQ96MF6 247 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 EIF5A2Q9GZV4 153 aaKnown RBP3.06□□□□□ -1.92
CSMD3-202ENST00000339701 ARL6Q9H0F7 186 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 CDT1Q9H211 546 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 FAM118AQ9NWS6 357 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 VNN3Q9NY84 501 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 DHDHQ9UQ10 334 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 SMIM28A0A1B0GU29 152 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 A0A1W2PPK0 400 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM63AO94886 807 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 SELEP16581 610 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 AQP2P41181 271 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 VIPR2P41587 438 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 CYB561P49447 251 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 GSK3AP49840 483 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 ERVK-25P63136 954 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 TOMM34Q15785 309 aaPredicted RBP3.06□□□□□ -1.92
CSMD3-202ENST00000339701 NTRK2Q16620 822 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 MEP1AQ16819 746 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 ARL13AQ5H913 290 aaPredicted RBP3.06□□□□□ -1.92
CSMD3-202ENST00000339701 AADACL2Q6P093 401 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 TBPL2Q6SJ96 375 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 CDH26Q8IXH8 852 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 CADM4Q8NFZ8 388 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 OR52H1Q8NGJ2 320 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 OR6K2Q8NGY2 324 aa3.06□□□□□ -1.92
CSMD3-202ENST00000339701 ARSGQ96EG1 525 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms