RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 KLHL26Q53HC5 615 aa13□□□□□ -0.33
PCDH8-201ENST00000338862 LRFN4Q6PJG9 635 aa13□□□□□ -0.33
PCDH8-201ENST00000338862 CD200R1LQ6Q8B3 271 aa13□□□□□ -0.33
PCDH8-201ENST00000338862 SDR16C5Q8N3Y7 309 aa13□□□□□ -0.33
PCDH8-201ENST00000338862 TOR1AIP2Q8NFQ8 470 aa13□□□□□ -0.33
PCDH8-201ENST00000338862 WNT2BQ93097 391 aa13□□□□□ -0.33
PCDH8-201ENST00000338862 TSNAXQ99598 290 aaKnown RBP13□□□□□ -0.33
PCDH8-201ENST00000338862 MEPEQ9NQ76 525 aaPredicted RBP13□□□□□ -0.33
PCDH8-201ENST00000338862 DUX4Q9UBX2 424 aa13□□□□□ -0.33
PCDH8-201ENST00000338862 KANTRA0A1W2PQU2 76 aa13□□□□□ -0.33
PCDH8-201ENST00000338862 XKRYO14609 159 aa13□□□□□ -0.33
PCDH8-201ENST00000338862 MYOGP15173 224 aa13□□□□□ -0.33
PCDH8-201ENST00000338862 CDK5R1Q15078 307 aa13□□□□□ -0.33
PCDH8-201ENST00000338862 LIPNQ5VXI9 398 aa13□□□□□ -0.33
PCDH8-201ENST00000338862 ZCCHC12Q6PEW1 402 aa13□□□□□ -0.33
PCDH8-201ENST00000338862 ZNF546Q86UE3 836 aa13□□□□□ -0.33
PCDH8-201ENST00000338862 OR8D2Q9GZM6 311 aa13□□□□□ -0.33
PCDH8-201ENST00000338862 ASF1BQ9NVP2 202 aa13□□□□□ -0.33
PCDH8-201ENST00000338862 GRHPRQ9UBQ7 328 aa13□□□□□ -0.33
PCDH8-201ENST00000338862 FBXO4Q9UKT5 387 aa13□□□□□ -0.33
PCDH8-201ENST00000338862 ZMIZ1Q9ULJ6 1067 aa13□□□□□ -0.33
PCDH8-201ENST00000338862 FITM1A5D6W6 292 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 ZFPL1O95159 310 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 EML2O95834 649 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 AGR2O95994 175 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 NID1P14543 1247 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 AKR1C4P17516 323 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 CXCL2P19875 107 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 BTCP35070 178 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 TM4SF4P48230 202 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 ACTA2P62736 377 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 ACTG2P63267 376 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 UBE2NLQ5JXB2 153 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 MRM1Q6IN84 353 aaKnown RBP12.99□□□□□ -0.33
PCDH8-201ENST00000338862 TMUB2Q71RG4 321 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 ZNF227Q86WZ6 799 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 KDM8Q8N371 416 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 MRPL43Q8N983 215 aaKnown RBP12.99□□□□□ -0.33
PCDH8-201ENST00000338862 OR10K1Q8NGX5 313 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 SFXN5Q8TD22 340 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 GPR137Q96N19 417 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 SORCS2Q96PQ0 1159 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 ALG12Q9BV10 488 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 POMT2Q9UKY4 750 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 EXOGQ9Y2C4 368 aaKnown RBP12.99□□□□□ -0.33
PCDH8-201ENST00000338862 NPFFR2Q9Y5X5 522 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 IFITM5A6NNB3 132 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 ZNF705EA8MWA4 302 aaPredicted RBP12.99□□□□□ -0.33
PCDH8-201ENST00000338862 CTNSO60931 367 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 IGHA1P01876 353 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 ZNF28P17035 718 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 GK2Q14410 553 aaPredicted RBP12.99□□□□□ -0.33
PCDH8-201ENST00000338862 TRAM1Q15629 374 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 FAM78AQ5JUQ0 283 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 ABHD13Q7L211 337 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 TAF8Q7Z7C8 310 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 RSPRY1Q96DX4 576 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 GDF15Q99988 308 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 ADAM29Q9UKF5 820 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 P2RX6O15547 441 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 SPINT1O43278 529 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 RNGTTO60942 597 aaKnown RBP12.99□□□□□ -0.33
PCDH8-201ENST00000338862 CCL5P13501 91 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 CTSEP14091 401 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 PBX2P40425 430 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 RPS15P62841 145 aaKnown RBP12.99□□□□□ -0.33
PCDH8-201ENST00000338862 TDGQ13569 410 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 KRT77Q7Z794 578 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 OR10AC1Q8NH08 325 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 SMIM4Q8WVI0 70 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 SMIM19Q96E16 107 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 PLXNA4Q9HCM2 1894 aa12.99□□□□□ -0.33
PCDH8-201ENST00000338862 H0YGG7 62 aa12.98□□□□□ -0.33
PCDH8-201ENST00000338862 PLPP2O43688 288 aa12.98□□□□□ -0.33
PCDH8-201ENST00000338862 EGFP01133 1207 aa12.98□□□□□ -0.33
PCDH8-201ENST00000338862 DNASE1L1P49184 302 aa12.98□□□□□ -0.33
PCDH8-201ENST00000338862 LUMP51884 338 aaPredicted RBP12.98□□□□□ -0.33
PCDH8-201ENST00000338862 ZP1P60852 638 aa12.98□□□□□ -0.33
PCDH8-201ENST00000338862 ARF3P61204 181 aaPredicted RBP12.98□□□□□ -0.33
PCDH8-201ENST00000338862 ITPRIPL2Q3MIP1 535 aa12.98□□□□□ -0.33
PCDH8-201ENST00000338862 CLLU1Q5K131 121 aa12.98□□□□□ -0.33
PCDH8-201ENST00000338862 RHOUQ7L0Q8 258 aa12.98□□□□□ -0.33
PCDH8-201ENST00000338862 DEFB119Q8N690 84 aa12.98□□□□□ -0.33
PCDH8-201ENST00000338862 CDRT4Q8N9R6 151 aa12.98□□□□□ -0.33
PCDH8-201ENST00000338862 OR4D10Q8NGI6 311 aa12.98□□□□□ -0.33
PCDH8-201ENST00000338862 PPP1R14AQ96A00 147 aa12.98□□□□□ -0.33
PCDH8-201ENST00000338862 RAB11FIP5Q9BXF6 653 aa12.98□□□□□ -0.33
PCDH8-201ENST00000338862 TMEM231Q9H6L2 316 aa12.98□□□□□ -0.33
PCDH8-201ENST00000338862 LRIT1Q9P2V4 623 aa12.98□□□□□ -0.33
PCDH8-201ENST00000338862 CGGBP1Q9UFW8 167 aaPredicted RBP12.98□□□□□ -0.33
PCDH8-201ENST00000338862 ZNF281Q9Y2X9 895 aa12.98□□□□□ -0.33
PCDH8-201ENST00000338862 FNDC1Q4ZHG4 1894 aaPredicted RBP12.98□□□□□ -0.33
PCDH8-201ENST00000338862 SDC3O75056 442 aa12.98□□□□□ -0.33
PCDH8-201ENST00000338862 CBX7O95931 251 aa12.98□□□□□ -0.33
PCDH8-201ENST00000338862 TACSTD2P09758 323 aa12.98□□□□□ -0.33
PCDH8-201ENST00000338862 CT62P0C5K7 136 aa12.98□□□□□ -0.33
PCDH8-201ENST00000338862 MMP15P51511 669 aa12.98□□□□□ -0.33
PCDH8-201ENST00000338862 DLX5P56178 289 aa12.98□□□□□ -0.33
PCDH8-201ENST00000338862 SEC61A1P61619 476 aaKnown RBP12.98□□□□□ -0.33
PCDH8-201ENST00000338862 MC2RQ01718 297 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms