RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 ATXN7O15265 892 aaPredicted RBP9.86□□□□□ -0.83
RTN3-201ENST00000338850 RASGRP1O95267 797 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 CBX7O95931 251 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 EIF4EP06730 217 aaKnown RBP9.86□□□□□ -0.83
RTN3-201ENST00000338850 PRG2P13727 222 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 PRKCAP17252 672 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 SHC1P29353 583 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 LCN1P31025 176 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 SSTR4P31391 388 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 PTGER1P34995 402 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 ADH7P40394 386 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 ACTR1BP42025 376 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 DIO1P49895 249 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 BLKP51451 505 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 GBX2P52951 348 aaPredicted RBP9.86□□□□□ -0.83
RTN3-201ENST00000338850 SLC25A1P53007 311 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 ACTR1AP61163 376 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 ARF3P61204 181 aaPredicted RBP9.86□□□□□ -0.83
RTN3-201ENST00000338850 RPS4XP62701 263 aaKnown RBP9.86□□□□□ -0.83
RTN3-201ENST00000338850 CD83Q01151 205 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 GALK2Q01415 458 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.86□□□□□ -0.83
RTN3-201ENST00000338850 TRMT12Q53H54 448 aaKnown RBP9.86□□□□□ -0.83
RTN3-201ENST00000338850 ELFN2Q5R3F8 820 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 ZNF57Q68EA5 555 aaPredicted RBP9.86□□□□□ -0.83
RTN3-201ENST00000338850 SLC6A19Q695T7 634 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 FAAH2Q6GMR7 532 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 ARL9Q6T311 187 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 ENPP7Q6UWV6 458 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 KCTD20Q7Z5Y7 419 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 MEX3DQ86XN8 651 aaKnown RBP9.86□□□□□ -0.83
RTN3-201ENST00000338850 SAMD12Q8N8I0 201 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 FAM98AQ8NCA5 519 aaKnown RBP9.86□□□□□ -0.83
RTN3-201ENST00000338850 FAM71CQ8NEG0 241 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 OR4M2Q8NGB6 313 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 OR13C2Q8NGS9 318 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 ZCCHC10Q8TBK6 192 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 TRMT10AQ8TBZ6 339 aaKnown RBP9.86□□□□□ -0.83
RTN3-201ENST00000338850 GPBAR1Q8TDU6 330 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 SMIM4Q8WVI0 70 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 YIPF5Q969M3 257 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 ANKRD9Q96BM1 317 aaPredicted RBP9.86□□□□□ -0.83
RTN3-201ENST00000338850 C4orf36Q96KX1 117 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 DMRTB1Q96MA1 342 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 GPR137Q96N19 417 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 DDOQ99489 341 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 CCDC3Q9BQI4 270 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 G6PC3Q9BUM1 346 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 NMNAT2Q9BZQ4 307 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 ABCG5Q9H222 651 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 LRRN3Q9H3W5 708 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 C12orf10Q9HB07 376 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 MKKSQ9NPJ1 570 aaPredicted RBP9.86□□□□□ -0.83
RTN3-201ENST00000338850 MCUBQ9NWR8 336 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 MOSPD1Q9UJG1 213 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 RASD1Q9Y272 281 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 NPTNQ9Y639 398 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 HELZ2Q9BYK8 2649 aaKnown RBP9.86□□□□□ -0.83
RTN3-201ENST00000338850 KALRNO60229 2985 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 PMS2P1A4D2B8 440 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 TUBAL3A6NHL2 446 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 FAM183AA6NL82 134 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 PEX12O00623 359 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 NTN3O00634 580 aaPredicted RBP9.85□□□□□ -0.83
RTN3-201ENST00000338850 FZD7O75084 574 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 NCR1O76036 304 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 EML2O95834 649 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 ECDO95905 644 aaPredicted RBP9.85□□□□□ -0.83
RTN3-201ENST00000338850 STATHP02808 62 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 ANXA3P12429 323 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 CTSEP14091 401 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 S1PR1P21453 382 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 STOMP27105 288 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 AGFG1P52594 562 aaKnown RBP9.85□□□□□ -0.83
RTN3-201ENST00000338850 PRPS1P60891 318 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 SRP54P61011 504 aaKnown RBP9.85□□□□□ -0.83
RTN3-201ENST00000338850 PSG6Q00889 435 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 ELOCQ15369 112 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 NTRK2Q16620 822 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 SLC36A2Q495M3 483 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 ACSM3Q53FZ2 586 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 UBE2NLQ5JXB2 153 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 BTN2A1Q7KYR7 527 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 RD3Q7Z3Z2 195 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 CEACAM19Q7Z692 300 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 TRIM48Q8IWZ4 208 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 ZNF595Q8IYB9 648 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 SDR16C5Q8N3Y7 309 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 LRRC17Q8N6Y2 441 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 CSNK1A1LQ8N752 337 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 OR7G1Q8NGA0 311 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 COL26A1Q96A83 441 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 SGTBQ96EQ0 304 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 LCORQ96JN0 433 aaPredicted RBP9.85□□□□□ -0.83
RTN3-201ENST00000338850 VSTM2LQ96N03 204 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 SLC46A1Q96NT5 459 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 HCAR1Q9BXC0 346 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 GSDMCQ9BYG8 508 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 CHRNA10Q9GZZ6 450 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 HDHD2Q9H0R4 259 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms