RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ARSKQ6UWY0 536 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 TMPRSS11AQ6ZMR5 421 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 LRRC69Q6ZNQ3 347 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 QSOX2Q6ZRP7 698 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 ZNF527Q8NB42 609 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 OR1N1Q8NGS0 311 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 ZNF426Q9BUY5 554 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 ZNF768Q9H5H4 540 aaKnown RBP11.45□□□□□ -0.58
LIMK1-201ENST00000336180 ANKRD10Q9NXR5 420 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 CHRNA9Q9UGM1 479 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 MN1Q10571 1320 aaPredicted RBP11.44□□□□□ -0.58
LIMK1-201ENST00000336180 FRYQ5TBA9 3013 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 AKAP8O43823 692 aaKnown RBP11.44□□□□□ -0.58
LIMK1-201ENST00000336180 F10P00742 488 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 ZNF12P17014 697 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 IL32P24001 234 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 CXCR1P25024 350 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 APEX1P27695 318 aaKnown RBP11.44□□□□□ -0.58
LIMK1-201ENST00000336180 NKX2-5P52952 324 aaPredicted RBP11.44□□□□□ -0.58
LIMK1-201ENST00000336180 RNF4P78317 190 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 RPL18Q07020 188 aaKnown RBP11.44□□□□□ -0.58
LIMK1-201ENST00000336180 C19orf57Q0VDD7 668 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 OXA1LQ15070 435 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 P2RY14Q15391 338 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 ETFDHQ16134 617 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.44□□□□□ -0.58
LIMK1-201ENST00000336180 ALG10Q5BKT4 473 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 ATG4DQ86TL0 474 aaPredicted RBP11.44□□□□□ -0.58
LIMK1-201ENST00000336180 DACT3Q96B18 629 aaPredicted RBP11.44□□□□□ -0.58
LIMK1-201ENST00000336180 CRB3Q9BUF7 120 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 POLE3Q9NRF9 147 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 BABAM2Q9NXR7 383 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 CCDC59Q9P031 241 aaKnown RBP11.44□□□□□ -0.58
LIMK1-201ENST00000336180 RARRES3Q9UL19 164 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 CACNA1HO95180 2353 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 A8MV72 311 aaPredicted RBP11.44□□□□□ -0.58
LIMK1-201ENST00000336180 RNF13O43567 381 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 TPBGQ13641 420 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 WBP2NLQ6ICG8 309 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 CEACAM19Q7Z692 300 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 GID4Q8IVV7 300 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 LILRB4Q8NHJ6 448 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 SNX33Q8WV41 574 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 EXOGQ9Y2C4 368 aaKnown RBP11.44□□□□□ -0.58
LIMK1-201ENST00000336180 KLHDC2Q9Y2U9 406 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 PEX16Q9Y5Y5 336 aa11.44□□□□□ -0.58
LIMK1-201ENST00000336180 DMXL1Q9Y485 3027 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 FRG2CA6NGY1 282 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 IGHA1P01876 353 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 HLA-DOBP13765 273 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 TGM1P22735 817 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 QPRTQ15274 297 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 ZNF79Q15937 498 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 ZNF74Q16587 644 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 HYAL4Q2M3T9 481 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 FNDC7Q5VTL7 733 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 LINC00114Q6XXX2 140 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 ESPNLQ6ZVH7 1005 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 SLC51BQ86UW2 128 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 OR8K3Q8NH51 312 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 OR1F2PQ96R84 312 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 AIFM2Q9BRQ8 373 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 SLC25A18Q9H1K4 315 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 PCED1AQ9H1Q7 454 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 SYT4Q9H2B2 425 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 B3GAT2Q9NPZ5 323 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 GTF2A1LQ9UNN4 478 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 MMACHCQ9Y4U1 282 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 LAMA5O15230 3695 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 TMEM72A0PK05 275 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 HLA-DQA2P01906 255 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 OR8G3PP0DMU2 310 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 SPI1P17947 270 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 EMP2P54851 167 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 MEP1BQ16820 701 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 PYDC2Q56P42 97 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 SLC35D2Q76EJ3 337 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 ANKRD37Q7Z713 158 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 PM20D2Q8IYS1 436 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 RDH10Q8IZV5 341 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 NPEPL1Q8NDH3 523 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 ADAMTS18Q8TE60 1221 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 GHSRQ92847 366 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 SLC25A46Q96AG3 418 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 WDR76Q9H967 626 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 SLC22A31A6NKX4 558 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 IFNGP01579 166 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 GABRA5P31644 462 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 RPS18P62269 152 aaKnown RBP11.43□□□□□ -0.58
LIMK1-201ENST00000336180 COL28A1Q2UY09 1125 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 GLYR1Q49A26 553 aaPredicted RBP11.43□□□□□ -0.58
LIMK1-201ENST00000336180 SLC6A19Q695T7 634 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 WDR74Q6RFH5 385 aaPredicted RBP11.43□□□□□ -0.58
LIMK1-201ENST00000336180 APCDD1LQ8NCL9 501 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 DNAJA4Q8WW22 397 aaPredicted RBP11.43□□□□□ -0.58
LIMK1-201ENST00000336180 HPS1Q92902 700 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 ARL5BQ96KC2 179 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 MROQ9BYG7 248 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 RAB33BQ9H082 229 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 RNF32Q9H0A6 362 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms