RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 SNRPBP14678 240 aaKnown RBP10.86□□□□□ -0.67
HDAC6-201ENST00000334136 CXCR1P25024 350 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 ZIC1Q15915 447 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 BEST3Q8N1M1 668 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 OR4M2Q8NGB6 313 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 SFXN5Q8TD22 340 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 ZNF566Q969W8 418 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 C8orf44Q96CB5 159 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 ADOQ96SZ5 270 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 OR10A5Q9H207 317 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 CXorf36Q9H7Y0 433 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 APMAPQ9HDC9 416 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 ACER3Q9NUN7 267 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 SLC7A7Q9UM01 511 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 NPIPA5A0A0B4J1W7 369 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 NPIPA7E9PJI5 369 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 PRAMEF4O60810 478 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 NPIPA8P0DM63 369 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 CFL1P23528 166 aaKnown RBP10.85□□□□□ -0.67
HDAC6-201ENST00000334136 SLC1A3P43003 542 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 CCR6P51684 374 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 CLDN6P56747 220 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 PRAMEF9Q5VWM5 478 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 MSRB3Q8IXL7 192 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 CLDN22Q8N7P3 220 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 TOR1AIP2Q8NFQ8 470 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 OR52I1Q8NGK6 324 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 SLC7A13Q8TCU3 470 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 GIMAP1Q8WWP7 306 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 MTHFD2LQ9H903 347 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-201ENST00000334136 BABAM2Q9NXR7 383 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 PPP4R1LQ9P1A2 415 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 CTSFQ9UBX1 484 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 PCDHGA1Q9Y5H4 931 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 ALPK2Q86TB3 2170 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 UPK1AO00322 258 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 PPP1R3DO95685 299 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 GP1BBP13224 206 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 RBM34P42696 430 aaKnown RBP10.85□□□□□ -0.67
HDAC6-201ENST00000334136 OR3A2P47893 321 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 DCAF7P61962 342 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 RHBDD2Q6NTF9 364 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 OPN5Q6U736 354 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 ZNF227Q86WZ6 799 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 VRK2Q86Y07 508 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 MCEMP1Q8IX19 187 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 IL17RDQ8NFM7 739 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 C4orf36Q96KX1 117 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 LDAHQ9H6V9 325 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 METTL8Q9H825 291 aaKnown RBP10.85□□□□□ -0.67
HDAC6-201ENST00000334136 MYEF2Q9P2K5 600 aaKnown RBP10.85□□□□□ -0.67
HDAC6-201ENST00000334136 LAMP5Q9UJQ1 280 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 NUBP2Q9Y5Y2 271 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 CEP250Q9BV73 2442 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 A0A1B0GVI7 797 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 PCNX2A6NKB5 2137 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 GIMD1P0DJR0 217 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 ERGP11308 486 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 EIF1AXP47813 144 aaKnown RBP10.85□□□□□ -0.67
HDAC6-201ENST00000334136 SRP9P49458 86 aaKnown RBP10.85□□□□□ -0.67
HDAC6-201ENST00000334136 CLDN12P56749 244 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 ARG2P78540 354 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 SAXO2Q658L1 398 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 ZNF793Q6ZN11 406 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 QSOX2Q6ZRP7 698 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 STX12Q86Y82 276 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 ZNF101Q8IZC7 436 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 TMEM163Q8TC26 289 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 CDS1Q92903 461 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 ELP4Q96EB1 424 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 RAB33BQ9H082 229 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 ZNF226Q9NYT6 803 aa10.85□□□□□ -0.67
HDAC6-201ENST00000334136 B8ZZF3 427 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 RENP00797 406 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 ZNF823P16415 610 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 ELAVL4P26378 380 aaKnown RBP10.84□□□□□ -0.67
HDAC6-201ENST00000334136 GABRA5P31644 462 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 ZNF41P51814 821 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-201ENST00000334136 COL28A1Q2UY09 1125 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 ZNF550Q7Z398 422 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 LRRC28Q86X40 367 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-201ENST00000334136 PTOV1Q86YD1 416 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 SLC41A2Q96JW4 573 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 ZNF582Q96NG8 517 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-201ENST00000334136 CST11Q9H112 138 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 ATG5Q9H1Y0 275 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 PIEZO1Q92508 2521 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 M0R036 132 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 KLK10O43240 276 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 RLN2P04090 185 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 PRKCAP17252 672 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 CSF2RBP32927 897 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 S100A10P60903 97 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 ERVK-25P63136 954 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.84□□□□□ -0.673e-6■□□□□ 10.8
HDAC6-201ENST00000334136 CCNJQ5T5M9 372 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 KLHL24Q6TFL4 600 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 OR6F1Q8NGZ6 308 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 FAM122AQ96E09 287 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 C16orf58Q96GQ5 468 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms