RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 LINC00696Q6ZRV3 163 aa8.6□□□□□ -1.03
C11orf54-201ENST00000331239 OLIG3Q7RTU3 272 aa8.6□□□□□ -1.03
C11orf54-201ENST00000331239 GDF7Q7Z4P5 450 aa8.6□□□□□ -1.03
C11orf54-201ENST00000331239 ATG4DQ86TL0 474 aaPredicted RBP8.6□□□□□ -1.03
C11orf54-201ENST00000331239 COMTD1Q86VU5 262 aa8.6□□□□□ -1.03
C11orf54-201ENST00000331239 PARP16Q8N5Y8 322 aa8.6□□□□□ -1.03
C11orf54-201ENST00000331239 POC5Q8NA72 575 aa8.6□□□□□ -1.03
C11orf54-201ENST00000331239 OR8J1Q8NGP2 316 aa8.6□□□□□ -1.03
C11orf54-201ENST00000331239 HTRA1Q92743 480 aa8.6□□□□□ -1.03
C11orf54-201ENST00000331239 DCBLD2Q96PD2 775 aa8.6□□□□□ -1.03
C11orf54-201ENST00000331239 RACGAP1Q9H0H5 632 aa8.6□□□□□ -1.03
C11orf54-201ENST00000331239 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.6□□□□□ -1.03
C11orf54-201ENST00000331239 UBQLN3Q9H347 655 aa8.6□□□□□ -1.03
C11orf54-201ENST00000331239 ACACAQ13085 2346 aa8.6□□□□□ -1.03
C11orf54-201ENST00000331239 PNMA8CA0A1B0GUJ8 204 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 A0A1B0GWA3 101 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 ACOT7O00154 380 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 DNPH1O43598 174 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 SCG5P05408 212 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 IGFBP1P08833 259 aaPredicted RBP8.59□□□□□ -1.03
C11orf54-201ENST00000331239 HTR2AP28223 471 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 ETV6P41212 452 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 DOC2BQ14184 412 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 SPANXN2Q5MJ10 180 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 MBOAT2Q6ZWT7 520 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 FAM83FQ8NEG4 500 aaPredicted RBP8.59□□□□□ -1.03
C11orf54-201ENST00000331239 ZNF563Q8TA94 476 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 SLC7A13Q8TCU3 470 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 HPS1Q92902 700 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 C3orf49Q96BT1 292 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 PIGQQ9BRB3 760 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 NUAK2Q9H093 628 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 MED17Q9NVC6 651 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 LSM2Q9Y333 95 aaKnown RBP8.59□□□□□ -1.03
C11orf54-201ENST00000331239 TPRP12270 2363 aaKnown RBP8.59□□□□□ -1.03
C11orf54-201ENST00000331239 APC2O95996 2303 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 HEATR5AQ86XA9 2040 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 A6NL46 340 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 OR2T1O43869 369 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 HCN1O60741 890 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 GPX5O75715 221 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 PRKCAP17252 672 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 ITPKBP27987 946 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 ZNF169Q14929 603 aaPredicted RBP8.59□□□□□ -1.03
C11orf54-201ENST00000331239 QPRTQ15274 297 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 PLPPR5Q32ZL2 321 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 ASB18Q6ZVZ8 466 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 MDGA2Q7Z553 956 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 SULF2Q8IWU5 870 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 CDK20Q8IZL9 346 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 OR5M3Q8NGP4 307 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 GIMAP1Q8WWP7 306 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 TMEM80Q96HE8 168 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 SIGLEC12Q96PQ1 595 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 MND1Q9BWT6 205 aa8.59□□□□□ -1.03
C11orf54-201ENST00000331239 RPL36Q9Y3U8 105 aaKnown RBP8.59□□□□□ -1.03
C11orf54-201ENST00000331239 A8MVM7 634 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 MT-ATP6P00846 226 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 CRYABP02511 175 aaKnown RBP8.58□□□□□ -1.04
C11orf54-201ENST00000331239 GKN3PP0CG01 181 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 DPP4P27487 766 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 GTF2E2P29084 291 aaKnown RBP8.58□□□□□ -1.04
C11orf54-201ENST00000331239 SLC9A3P48764 834 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 ALDH6A1Q02252 535 aaKnown RBP8.58□□□□□ -1.04
C11orf54-201ENST00000331239 SELENBP1Q13228 472 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 C4orf46Q504U0 113 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 ALG10BQ5I7T1 473 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 SPINK14Q6IE38 97 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 RPL13AP3Q6NVV1 102 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 CBLN3Q6UW01 205 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 RRM2BQ7LG56 351 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 FAM109AQ8N4B1 249 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 CLDN22Q8N7P3 220 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 TCEANCQ8N8B7 351 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 PNPLA2Q96AD5 504 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 PRSS27Q9BQR3 290 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 WFDC6Q9BQY6 131 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 TSSK6Q9BXA6 273 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 RTN4RQ9BZR6 473 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 NDEL1Q9GZM8 345 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 EXOSC4Q9NPD3 245 aaKnown RBP8.58□□□□□ -1.04
C11orf54-201ENST00000331239 MAN2C1Q9NTJ4 1040 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 TRAPPC4Q9Y296 219 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 A0A075B6Q4 140 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 LRRC3CA6NJW4 275 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 ELOA3DA6NLF2 546 aaPredicted RBP8.58□□□□□ -1.04
C11orf54-201ENST00000331239 LOC110117498-PIK3R3F6TDL0 507 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 MASP2O00187 686 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 ACTL6AO96019 429 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 PRG2P13727 222 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 CXCR1P25024 350 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 DEFA1P59665 94 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 DEFA3P59666 94 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 CXADRP78310 365 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 PIN1Q13526 163 aaPredicted RBP8.58□□□□□ -1.04
C11orf54-201ENST00000331239 KRR1Q13601 381 aaKnown RBP8.58□□□□□ -1.04
C11orf54-201ENST00000331239 C1DQ13901 141 aaKnown RBP8.58□□□□□ -1.04
C11orf54-201ENST00000331239 SPHARQ15513 63 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 OCLNQ16625 522 aa8.58□□□□□ -1.04
C11orf54-201ENST00000331239 ELOA3BQ3SY89 546 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms