RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 SHARPINQ9H0F6 387 aa9.82□□□□□ -0.84
CLN8-201ENST00000331222 UNKLQ9H9P5 680 aaKnown RBP9.82□□□□□ -0.84
CLN8-201ENST00000331222 TXNL4BQ9NX01 149 aaKnown RBP9.82□□□□□ -0.84
CLN8-201ENST00000331222 CLEC5AQ9NY25 188 aa9.82□□□□□ -0.84
CLN8-201ENST00000331222 TMEM9Q9P0T7 183 aa9.82□□□□□ -0.84
CLN8-201ENST00000331222 PURGQ9UJV8 347 aaKnown RBP9.82□□□□□ -0.84
CLN8-201ENST00000331222 FZR1Q9UM11 496 aa9.82□□□□□ -0.84
CLN8-201ENST00000331222 FADS1O60427 444 aa9.82□□□□□ -0.84
CLN8-201ENST00000331222 MAKP20794 623 aa9.82□□□□□ -0.84
CLN8-201ENST00000331222 CA5AP35218 305 aa9.82□□□□□ -0.84
CLN8-201ENST00000331222 UBE2NLQ5JXB2 153 aa9.82□□□□□ -0.84
CLN8-201ENST00000331222 TBPL2Q6SJ96 375 aa9.82□□□□□ -0.84
CLN8-201ENST00000331222 BCDIN3DQ7Z5W3 292 aaKnown RBP9.82□□□□□ -0.84
CLN8-201ENST00000331222 CMTM2Q8TAZ6 248 aa9.82□□□□□ -0.84
CLN8-201ENST00000331222 FER1L6-AS2Q96M78 137 aa9.82□□□□□ -0.84
CLN8-201ENST00000331222 C20orf24Q9BUV8 137 aa9.82□□□□□ -0.84
CLN8-201ENST00000331222 NTMT1Q9BV86 223 aa9.82□□□□□ -0.84
CLN8-201ENST00000331222 PIGLQ9Y2B2 252 aa9.82□□□□□ -0.84
CLN8-201ENST00000331222 TRBV4-1A0A0J9YWV2 114 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 hCG_1809904A0A1W2PP81 198 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 A0A1W2PPE2 198 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 A0A1W2PR64 198 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 BCKDHBP21953 392 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 BLVRBP30043 206 aaPredicted RBP9.81□□□□□ -0.84
CLN8-201ENST00000331222 ELLP55199 621 aaPredicted RBP9.81□□□□□ -0.84
CLN8-201ENST00000331222 TBC1D28Q2M2D7 210 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 CTSL3PQ5NE16 218 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 NECAP1Q8NC96 275 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 INSM2Q96T92 566 aaPredicted RBP9.81□□□□□ -0.84
CLN8-201ENST00000331222 WDR76Q9H967 626 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 PATZ1Q9HBE1 687 aaKnown RBP9.81□□□□□ -0.84
CLN8-201ENST00000331222 NXT1Q9UKK6 140 aaKnown RBP9.81□□□□□ -0.84
CLN8-201ENST00000331222 HNRNPA1L2Q32P51 320 aaKnown RBP9.81□□□□□ -0.84
CLN8-201ENST00000331222 OR2G6Q5TZ20 316 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 DTWD1Q8N5C7 304 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 LINC01599Q8WXQ3 324 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 OR52D1Q9H346 318 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 SEC14L6B5MCN3 397 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 NME2P22392 152 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 HTR3AP46098 478 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 RAB11AP62491 216 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 HBA1P69905 142 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 BPIFB2Q8N4F0 458 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 UHRF2Q96PU4 802 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 KLF16Q9BXK1 252 aaPredicted RBP9.81□□□□□ -0.84
CLN8-201ENST00000331222 METTL9Q9H1A3 318 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 KIAA0100Q14667 2235 aaKnown RBP9.81□□□□□ -0.84
CLN8-201ENST00000331222 MIA3Q5JRA6 1907 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 A8MVM7 634 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 OR8G1Q15617 311 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 METTL11BQ5VVY1 283 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 LCTLQ6UWM7 567 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 RABEPKQ7Z6M1 372 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 FGGYQ96C11 551 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 GDE1Q9NZC3 331 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 FBXL2Q9UKC9 423 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 SSUH2Q9Y2M2 353 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 NUP188Q5SRE5 1749 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 NUP214P35658 2090 aaPredicted RBP9.81□□□□□ -0.84
CLN8-201ENST00000331222 C17orf113A0A1B0GUU1 675 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 ZNF732B4DXR9 585 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 ZNF264O43296 627 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 TPT1P13693 172 aaKnown RBP9.81□□□□□ -0.84
CLN8-201ENST00000331222 SDC1P18827 310 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 SORDQ00796 357 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 ZNF546Q86UE3 836 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 OR5M9Q8NGP3 310 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 MFFQ9GZY8 342 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 ACOT13Q9NPJ3 140 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 RNF150Q9ULK6 438 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 USP22Q9UPT9 525 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 KIR2DS5A0A0G2JLQ3 304 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 A0A0G2JNG1 304 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 KIR2DS3K7RE56 304 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 TNFRSF10AO00220 468 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 PRKACAP17612 351 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 PROZP22891 400 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 RRADP55042 308 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 P2RX3P56373 397 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 KIR2DS5Q14953 304 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 PM20D2Q8IYS1 436 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 MINDY1Q8N5J2 469 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 MAF1Q9H063 256 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 C10orf71Q711Q0 1435 aa9.81□□□□□ -0.84
CLN8-201ENST00000331222 NRXN3Q9Y4C0 1643 aa9.8□□□□□ -0.84
CLN8-201ENST00000331222 LAMA4Q16363 1823 aa9.8□□□□□ -0.84
CLN8-201ENST00000331222 RPS10-NUDT3A0A1W2PQS6 291 aa9.8□□□□□ -0.84
CLN8-201ENST00000331222 DEGS1O15121 323 aa9.8□□□□□ -0.84
CLN8-201ENST00000331222 SOX15O60248 233 aa9.8□□□□□ -0.84
CLN8-201ENST00000331222 ZNF728P0DKX0 622 aa9.8□□□□□ -0.84
CLN8-201ENST00000331222 CYBAP13498 195 aa9.8□□□□□ -0.84
CLN8-201ENST00000331222 GJA4P35212 333 aa9.8□□□□□ -0.84
CLN8-201ENST00000331222 RPS10P46783 165 aaKnown RBP9.8□□□□□ -0.84
CLN8-201ENST00000331222 ZNF74Q16587 644 aa9.8□□□□□ -0.84
CLN8-201ENST00000331222 MEPCEQ7L2J0 689 aaKnown RBP9.8□□□□□ -0.84
CLN8-201ENST00000331222 SCD5Q86SK9 330 aa9.8□□□□□ -0.84
CLN8-201ENST00000331222 OR13J1Q8NGT2 312 aa9.8□□□□□ -0.84
CLN8-201ENST00000331222 SLCO2A1Q92959 643 aa9.8□□□□□ -0.84
CLN8-201ENST00000331222 ZDHHC16Q969W1 377 aa9.8□□□□□ -0.84
CLN8-201ENST00000331222 UPRTQ96BW1 309 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms