RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 NIT2Q9NQR4 276 aa14.09□□□□□ -0.15
VARS2-201ENST00000321897 ING1Q9UK53 422 aaPredicted RBP14.09□□□□□ -0.15
VARS2-201ENST00000321897 PLXNA1Q9UIW2 1896 aa14.09□□□□□ -0.15
VARS2-201ENST00000321897 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.09□□□□□ -0.15
VARS2-201ENST00000321897 A0A1B0GWA3 101 aa14.09□□□□□ -0.15
VARS2-201ENST00000321897 TMEM72A0PK05 275 aa14.09□□□□□ -0.15
VARS2-201ENST00000321897 CASC3O15234 703 aaKnown RBP14.09□□□□□ -0.15
VARS2-201ENST00000321897 DCNP07585 359 aaKnown RBP14.09□□□□□ -0.15
VARS2-201ENST00000321897 SFTPBP07988 381 aa14.09□□□□□ -0.15
VARS2-201ENST00000321897 DLSTP36957 453 aa14.09□□□□□ -0.15
VARS2-201ENST00000321897 RAP2BP61225 183 aa14.09□□□□□ -0.15
VARS2-201ENST00000321897 PLCXD2Q0VAA5 305 aa14.09□□□□□ -0.15
VARS2-201ENST00000321897 SFRP5Q5T4F7 317 aa14.09□□□□□ -0.15
VARS2-201ENST00000321897 TMEM81Q6P7N7 255 aa14.09□□□□□ -0.15
VARS2-201ENST00000321897 OR8D4Q8NGM9 314 aa14.09□□□□□ -0.15
VARS2-201ENST00000321897 ZNF775Q96BV0 537 aaPredicted RBP14.09□□□□□ -0.15
VARS2-201ENST00000321897 RASD2Q96D21 266 aa14.09□□□□□ -0.15
VARS2-201ENST00000321897 FBXL4Q9UKA2 621 aa14.09□□□□□ -0.15
VARS2-201ENST00000321897 MAFFQ9ULX9 164 aa14.09□□□□□ -0.15
VARS2-201ENST00000321897 BRCA1P38398 1863 aaKnown RBP14.08□□□□□ -0.15
VARS2-201ENST00000321897 MAN2B1O00754 1011 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 CEACAM5P06731 702 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 RBMS1P29558 406 aaKnown RBP14.08□□□□□ -0.16
VARS2-201ENST00000321897 MAGEB1P43366 347 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 PPP1CAP62136 330 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 SNRPGP62308 76 aaKnown RBP14.08□□□□□ -0.16
VARS2-201ENST00000321897 SLC25A35Q3KQZ1 300 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 CDNFQ49AH0 187 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 TMEM196Q5HYL7 178 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 BRIX1Q8TDN6 353 aaKnown RBP14.08□□□□□ -0.16
VARS2-201ENST00000321897 FAM46BQ96A09 425 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 ULBP3Q9BZM4 244 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 PLEKHB1Q9UF11 243 aaPredicted RBP14.08□□□□□ -0.16
VARS2-201ENST00000321897 CD207Q9UJ71 328 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 FFAR1O14842 300 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 GREM1O60565 184 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 APBB3O95704 486 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 LGI1O95970 557 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 TPOP07202 933 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 LSSP48449 732 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 ARFRP1Q13795 201 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 SLC29A4Q7RTT9 530 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 ATCAYQ86WG3 371 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 CMIPQ8IY22 773 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 SLC6A20Q9NP91 592 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 ALKBH4Q9NXW9 302 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 GREB1Q4ZG55 1949 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 ZNF646O15015 1829 aaPredicted RBP14.08□□□□□ -0.16
VARS2-201ENST00000321897 CDHR4A6H8M9 788 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 MTRF1O75570 445 aaKnown RBP14.08□□□□□ -0.16
VARS2-201ENST00000321897 CPEP16870 476 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 CSNK1EP49674 416 aaKnown RBP14.08□□□□□ -0.16
VARS2-201ENST00000321897 BTG2P78543 158 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 AGBL4Q5VU57 503 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 GLT8D1Q68CQ7 371 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 ADAMTSL4Q6UY14 1074 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 C12orf45Q8N5I9 185 aaPredicted RBP14.08□□□□□ -0.16
VARS2-201ENST00000321897 OR52I2Q8NH67 350 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 NPRL2Q8WTW4 380 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 TCEAL3Q969E4 200 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 A4GALTQ9NPC4 353 aa14.08□□□□□ -0.16
VARS2-201ENST00000321897 CCSO14618 274 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 NDUFB2O95178 105 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 AHSA1O95433 338 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 TACSTD2P09758 323 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 GP1BBP13224 206 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 CTHP32929 405 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 OPRD1P41143 372 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 ZP2Q05996 745 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 ZNF616Q08AN1 781 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 QSOX2Q6ZRP7 698 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 ZNF550Q7Z398 422 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 CD163Q86VB7 1156 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 NUDT22Q9BRQ3 303 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 C1QTNF2Q9BXJ5 285 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 RXFP3Q9NSD7 469 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 ROS1P08922 2347 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 SPTAN1Q13813 2472 aaKnown RBP14.07□□□□□ -0.16
VARS2-201ENST00000321897 IGHV3-20A0A0C4DH32 117 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 TTLL8A6PVC2 850 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 AGAP14A8MT82 685 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 C1orf196B1AJZ1 125 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 CBX7O95931 251 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 TRHRP34981 398 aaPredicted RBP14.07□□□□□ -0.16
VARS2-201ENST00000321897 BTG1P62324 171 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 NFATC4Q14934 902 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 ZNF836Q6ZNA1 936 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 ATF6BQ99941 703 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 BIN3Q9NQY0 253 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 GLS2Q9UI32 602 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 GMEB2Q9UKD1 530 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 ABCA7Q8IZY2 2146 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 UBL3O95164 117 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 GLAP06280 429 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 RAB3AP20336 220 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 CD34P28906 385 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 TMEM151BQ8IW70 566 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 C9orf62Q8N4C0 152 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 RPS10P5Q9NQ39 176 aa14.07□□□□□ -0.16
VARS2-201ENST00000321897 CASP8AP2Q9UKL3 1982 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms