RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 IGHV4-61A0A0C4DH41 118 aa12.38□□□□□ -0.43
RPP40-201ENST00000319533 B9A039 149 aa12.38□□□□□ -0.43
RPP40-201ENST00000319533 GPIP06744 558 aa12.38□□□□□ -0.43
RPP40-201ENST00000319533 DBIP07108 87 aaKnown RBP12.38□□□□□ -0.43
RPP40-201ENST00000319533 UQCRBP14927 111 aa12.38□□□□□ -0.43
RPP40-201ENST00000319533 SERPINF1P36955 418 aa12.38□□□□□ -0.43
RPP40-201ENST00000319533 DSTNP60981 165 aa12.38□□□□□ -0.43
RPP40-201ENST00000319533 SNRPD2P62316 118 aaKnown RBP12.38□□□□□ -0.43
RPP40-201ENST00000319533 CEACAM7Q14002 265 aa12.38□□□□□ -0.43
RPP40-201ENST00000319533 GGTLC2Q14390 218 aa12.38□□□□□ -0.43
RPP40-201ENST00000319533 MAPK11Q15759 364 aa12.38□□□□□ -0.43
RPP40-201ENST00000319533 EFNB3Q15768 340 aa12.38□□□□□ -0.43
RPP40-201ENST00000319533 TBRG1Q3YBR2 411 aa12.38□□□□□ -0.43
RPP40-201ENST00000319533 MRPL2Q5T653 305 aaKnown RBP12.38□□□□□ -0.43
RPP40-201ENST00000319533 SLC2A7Q6PXP3 512 aa12.38□□□□□ -0.43
RPP40-201ENST00000319533 BLOC1S3Q6QNY0 202 aa12.38□□□□□ -0.43
RPP40-201ENST00000319533 AAED1Q7RTV5 226 aa12.38□□□□□ -0.43
RPP40-201ENST00000319533 LSRQ86X29 649 aaPredicted RBP12.38□□□□□ -0.43
RPP40-201ENST00000319533 PEX5LQ8IYB4 626 aa12.38□□□□□ -0.43
RPP40-201ENST00000319533 ZNF440Q8IYI8 595 aa12.38□□□□□ -0.43
RPP40-201ENST00000319533 FAM169BQ8N8A8 192 aa12.38□□□□□ -0.43
RPP40-201ENST00000319533 OR1K1Q8NGR3 316 aa12.38□□□□□ -0.43
RPP40-201ENST00000319533 MAGEE2Q8TD90 523 aaPredicted RBP12.38□□□□□ -0.43
RPP40-201ENST00000319533 WDR60Q8WVS4 1066 aa12.38□□□□□ -0.43
RPP40-201ENST00000319533 GTF2H4Q92759 462 aa12.38□□□□□ -0.43
RPP40-201ENST00000319533 THOC1Q96FV9 657 aaKnown RBP12.38□□□□□ -0.43
RPP40-201ENST00000319533 SLC38A2Q96QD8 506 aa12.38□□□□□ -0.43
RPP40-201ENST00000319533 CA10Q9NS85 328 aa12.38□□□□□ -0.43
RPP40-201ENST00000319533 SLC6A13Q9NSD5 602 aa12.38□□□□□ -0.43
RPP40-201ENST00000319533 A0A096LPI6 279 aa12.37□□□□□ -0.43
RPP40-201ENST00000319533 A0A0G2JND7 137 aa12.37□□□□□ -0.43
RPP40-201ENST00000319533 LOC100289279A0A1B0GTE1 492 aa12.37□□□□□ -0.43
RPP40-201ENST00000319533 CDHR4A6H8M9 788 aa12.37□□□□□ -0.43
RPP40-201ENST00000319533 OR6C65A6NJZ3 312 aa12.37□□□□□ -0.43
RPP40-201ENST00000319533 AKR7A3O95154 331 aa12.37□□□□□ -0.43
RPP40-201ENST00000319533 VAMP5O95183 116 aa12.37□□□□□ -0.43
RPP40-201ENST00000319533 IGLV1-44P01699 117 aa12.37□□□□□ -0.43
RPP40-201ENST00000319533 APEHP13798 732 aaKnown RBP12.37□□□□□ -0.43
RPP40-201ENST00000319533 ETFAP13804 333 aa12.37□□□□□ -0.43
RPP40-201ENST00000319533 IL7RP16871 459 aa12.37□□□□□ -0.43
RPP40-201ENST00000319533 ZNF23P17027 643 aa12.37□□□□□ -0.43
RPP40-201ENST00000319533 NCF2P19878 526 aaPredicted RBP12.37□□□□□ -0.43
RPP40-201ENST00000319533 ACAA2P42765 397 aaKnown RBP12.37□□□□□ -0.43
RPP40-201ENST00000319533 CRISP3P54108 245 aa12.37□□□□□ -0.43
RPP40-201ENST00000319533 OR7A5Q15622 319 aa12.37□□□□□ -0.43
RPP40-201ENST00000319533 ADIPOQQ15848 244 aa12.37□□□□□ -0.43
RPP40-201ENST00000319533 GTDC1Q4AE62 458 aa12.37□□□□□ -0.43
RPP40-201ENST00000319533 AGKQ53H12 422 aa12.37□□□□□ -0.43
RPP40-201ENST00000319533 ZNF540Q8NDQ6 660 aa12.37□□□□□ -0.43
RPP40-201ENST00000319533 BCL2L2Q92843 193 aaPredicted RBP12.37□□□□□ -0.43
RPP40-201ENST00000319533 AURKBQ96GD4 344 aaPredicted RBP12.37□□□□□ -0.43
RPP40-201ENST00000319533 FOXN4Q96NZ1 517 aa12.37□□□□□ -0.43
RPP40-201ENST00000319533 CCT8L2Q96SF2 557 aa12.37□□□□□ -0.43
RPP40-201ENST00000319533 PLK3Q9H4B4 646 aa12.37□□□□□ -0.43
RPP40-201ENST00000319533 FBXO9Q9UK97 447 aaPredicted RBP12.37□□□□□ -0.43
RPP40-201ENST00000319533 PCDHB14Q9Y5E9 798 aa12.37□□□□□ -0.43
RPP40-201ENST00000319533 DSPPQ9NZW4 1301 aa12.37□□□□□ -0.43
RPP40-201ENST00000319533 CLIC1O00299 241 aa12.36□□□□□ -0.43
RPP40-201ENST00000319533 NPIPB7O75200 414 aa12.36□□□□□ -0.43
RPP40-201ENST00000319533 LGI1O95970 557 aa12.36□□□□□ -0.43
RPP40-201ENST00000319533 FAM107AO95990 144 aa12.36□□□□□ -0.43
RPP40-201ENST00000319533 CRYAAP02489 173 aa12.36□□□□□ -0.43
RPP40-201ENST00000319533 TROVE2P10155 538 aaKnown RBP eCLIP12.36□□□□□ -0.43
RPP40-201ENST00000319533 PPIBP23284 216 aaKnown RBP12.36□□□□□ -0.43
RPP40-201ENST00000319533 CXCR1P25024 350 aa12.36□□□□□ -0.43
RPP40-201ENST00000319533 PPOXP50336 477 aa12.36□□□□□ -0.43
RPP40-201ENST00000319533 MVDP53602 400 aa12.36□□□□□ -0.43
RPP40-201ENST00000319533 NAAAQ02083 359 aa12.36□□□□□ -0.43
RPP40-201ENST00000319533 GABPB1Q06547 395 aaPredicted RBP12.36□□□□□ -0.43
RPP40-201ENST00000319533 FADDQ13158 208 aa12.36□□□□□ -0.43
RPP40-201ENST00000319533 ZSWIM7Q19AV6 140 aa12.36□□□□□ -0.43
RPP40-201ENST00000319533 ANKRD16Q6P6B7 361 aa12.36□□□□□ -0.43
RPP40-201ENST00000319533 CREB3L2Q70SY1 520 aa12.36□□□□□ -0.43
RPP40-201ENST00000319533 EPHX4Q8IUS5 362 aa12.36□□□□□ -0.43
RPP40-201ENST00000319533 FUNDC1Q8IVP5 155 aa12.36□□□□□ -0.43
RPP40-201ENST00000319533 LINC00470Q9BZP3 86 aa12.36□□□□□ -0.43
RPP40-201ENST00000319533 PAIP1Q9H074 479 aaKnown RBP12.36□□□□□ -0.43
RPP40-201ENST00000319533 MOV10Q9HCE1 1003 aaKnown RBP12.36□□□□□ -0.43
RPP40-201ENST00000319533 RLIMQ9NVW2 624 aa12.36□□□□□ -0.43
RPP40-201ENST00000319533 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.36□□□□□ -0.43
RPP40-201ENST00000319533 A8MVM7 634 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 ZNF587BE7ETH6 402 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 FZD7O75084 574 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 IGKV3-15P01624 115 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 BCHEP06276 602 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 C8BP07358 591 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 OR4A8P0C604 315 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 CECR9P0C854 216 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 CDH2P19022 906 aaPredicted RBP12.35□□□□□ -0.43
RPP40-201ENST00000319533 HNF1AP20823 631 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 GIFP27352 417 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 SELENOPP49908 381 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 LIN52Q52LA3 116 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 LRIF1Q5T3J3 769 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 TMEM225Q6GV28 225 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 WBP2NLQ6ICG8 309 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 IL17RELQ6ZVW7 336 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 LINGO2Q7L985 606 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 GPAT4Q86UL3 456 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 ANKS4BQ8N8V4 417 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms