RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 HOXB1P14653 301 aaPredicted RBP15.54■□□□□ 0.08
TPM1-203ENST00000317516 PTNP21246 168 aa15.54■□□□□ 0.08
TPM1-203ENST00000317516 PCSK6P29122 969 aa15.54■□□□□ 0.08
TPM1-203ENST00000317516 RGS8P57771 180 aaPredicted RBP15.54■□□□□ 0.08
TPM1-203ENST00000317516 RBBP4Q09028 425 aa15.54■□□□□ 0.08
TPM1-203ENST00000317516 RUNDC3AQ59EK9 446 aa15.54■□□□□ 0.08
TPM1-203ENST00000317516 DLEU7Q6UYE1 221 aa15.54■□□□□ 0.08
TPM1-203ENST00000317516 H1FNTQ75WM6 255 aaPredicted RBP15.54■□□□□ 0.08
TPM1-203ENST00000317516 RANBP3LQ86VV4 465 aaPredicted RBP15.54■□□□□ 0.08
TPM1-203ENST00000317516 ARMC8Q8IUR7 673 aa15.54■□□□□ 0.08
TPM1-203ENST00000317516 KDM8Q8N371 416 aa15.54■□□□□ 0.08
TPM1-203ENST00000317516 C11orf65Q8NCR3 313 aa15.54■□□□□ 0.08
TPM1-203ENST00000317516 ANKK1Q8NFD2 765 aa15.54■□□□□ 0.08
TPM1-203ENST00000317516 TSPEARQ8WU66 669 aa15.54■□□□□ 0.08
TPM1-203ENST00000317516 RHNO1Q9BSD3 238 aa15.54■□□□□ 0.08
TPM1-203ENST00000317516 CACNG6Q9BXT2 260 aa15.54■□□□□ 0.08
TPM1-203ENST00000317516 PMF1-BGLAPU3KQ54 211 aa15.54■□□□□ 0.08
TPM1-203ENST00000317516 LOC102725191A0A1B0GVB3 256 aa15.53■□□□□ 0.08
TPM1-203ENST00000317516 AKAP8O43823 692 aaKnown RBP15.53■□□□□ 0.08
TPM1-203ENST00000317516 TPST1O60507 370 aa15.53■□□□□ 0.08
TPM1-203ENST00000317516 SLC43A1O75387 559 aa15.53■□□□□ 0.08
TPM1-203ENST00000317516 LGI1O95970 557 aa15.53■□□□□ 0.08
TPM1-203ENST00000317516 TP53P04637 393 aaPredicted RBP15.53■□□□□ 0.08
TPM1-203ENST00000317516 HTR2AP28223 471 aa15.53■□□□□ 0.08
TPM1-203ENST00000317516 AQP1P29972 269 aa15.53■□□□□ 0.08
TPM1-203ENST00000317516 APOBEC3AP31941 199 aaPredicted RBP15.53■□□□□ 0.08
TPM1-203ENST00000317516 NUDT6P53370 316 aa15.53■□□□□ 0.08
TPM1-203ENST00000317516 SH3BGRP55822 239 aaPredicted RBP15.53■□□□□ 0.08
TPM1-203ENST00000317516 CLDN17P56750 224 aa15.53■□□□□ 0.08
TPM1-203ENST00000317516 DSCR9P59020 149 aa15.53■□□□□ 0.08
TPM1-203ENST00000317516 IL1RL1Q01638 556 aa15.53■□□□□ 0.08
TPM1-203ENST00000317516 SPOCK1Q08629 439 aa15.53■□□□□ 0.08
TPM1-203ENST00000317516 ADRM1Q16186 407 aa15.53■□□□□ 0.08
TPM1-203ENST00000317516 TBRG1Q3YBR2 411 aa15.53■□□□□ 0.08
TPM1-203ENST00000317516 HIKESHIQ53FT3 197 aa15.53■□□□□ 0.08
TPM1-203ENST00000317516 METTL21CQ5VZV1 264 aa15.53■□□□□ 0.08
TPM1-203ENST00000317516 ANKRD16Q6P6B7 361 aa15.53■□□□□ 0.08
TPM1-203ENST00000317516 LSRQ86X29 649 aaPredicted RBP15.53■□□□□ 0.08
TPM1-203ENST00000317516 C10orf111Q8N326 155 aa15.53■□□□□ 0.08
TPM1-203ENST00000317516 DPP10Q8N608 796 aa15.53■□□□□ 0.08
TPM1-203ENST00000317516 OR1K1Q8NGR3 316 aa15.53■□□□□ 0.08
TPM1-203ENST00000317516 OR6S1Q8NH40 331 aa15.53■□□□□ 0.08
TPM1-203ENST00000317516 MAGEE2Q8TD90 523 aaPredicted RBP15.53■□□□□ 0.08
TPM1-203ENST00000317516 TAAR8Q969N4 342 aa15.53■□□□□ 0.08
TPM1-203ENST00000317516 THOC1Q96FV9 657 aaKnown RBP15.53■□□□□ 0.08
TPM1-203ENST00000317516 CPPED1Q9BRF8 314 aaPredicted RBP15.53■□□□□ 0.08
TPM1-203ENST00000317516 IKZF5Q9H5V7 419 aa15.53■□□□□ 0.08
TPM1-203ENST00000317516 GDF2Q9UK05 429 aaPredicted RBP15.53■□□□□ 0.08
TPM1-203ENST00000317516 CORINQ9Y5Q5 1042 aa15.53■□□□□ 0.08
TPM1-203ENST00000317516 A0A087WUJ7 227 aa15.52■□□□□ 0.08
TPM1-203ENST00000317516 M0R082 166 aa15.52■□□□□ 0.08
TPM1-203ENST00000317516 SSX4O60224 188 aa15.52■□□□□ 0.08
TPM1-203ENST00000317516 FZD7O75084 574 aa15.52■□□□□ 0.08
TPM1-203ENST00000317516 NDUFS7O75251 213 aa15.52■□□□□ 0.08
TPM1-203ENST00000317516 UPK3AO75631 287 aa15.52■□□□□ 0.08
TPM1-203ENST00000317516 SLC25A3Q00325 362 aa15.52■□□□□ 0.08
TPM1-203ENST00000317516 ROR2Q01974 943 aaKnown RBP15.52■□□□□ 0.08
TPM1-203ENST00000317516 OR1Q1Q15612 314 aa15.52■□□□□ 0.08
TPM1-203ENST00000317516 CYP51A1Q16850 503 aa15.52■□□□□ 0.08
TPM1-203ENST00000317516 GLIPR1L2Q4G1C9 344 aa15.52■□□□□ 0.08
TPM1-203ENST00000317516 SWT1Q5T5J6 900 aaKnown RBP15.52■□□□□ 0.08
TPM1-203ENST00000317516 C11orf71Q6IPW1 123 aa15.52■□□□□ 0.08
TPM1-203ENST00000317516 DHDDSQ86SQ9 333 aa15.52■□□□□ 0.08
TPM1-203ENST00000317516 GPR137CQ8N3F9 429 aa15.52■□□□□ 0.08
TPM1-203ENST00000317516 ZNF417Q8TAU3 575 aa15.52■□□□□ 0.08
TPM1-203ENST00000317516 BCL2L2Q92843 193 aaPredicted RBP15.52■□□□□ 0.08
TPM1-203ENST00000317516 ANKRD27Q96NW4 1050 aa15.52■□□□□ 0.08
TPM1-203ENST00000317516 ALKBH3Q96Q83 286 aaPredicted RBP15.52■□□□□ 0.08
TPM1-203ENST00000317516 ZNF587Q96SQ5 575 aaPredicted RBP15.52■□□□□ 0.08
TPM1-203ENST00000317516 CGREF1Q99674 301 aa15.52■□□□□ 0.08
TPM1-203ENST00000317516 ARPC4-TTLL3A0A0A6YYG9 625 aa15.51■□□□□ 0.07
TPM1-203ENST00000317516 RPL36A-HNRNPH2H7BZ11 118 aa15.51■□□□□ 0.07
TPM1-203ENST00000317516 EDF1O60869 148 aaKnown RBP15.51■□□□□ 0.07
TPM1-203ENST00000317516 MFN2O95140 757 aa15.51■□□□□ 0.07
TPM1-203ENST00000317516 CRYAAP02489 173 aa15.51■□□□□ 0.07
TPM1-203ENST00000317516 NQO1P15559 274 aaKnown RBP15.51■□□□□ 0.07
TPM1-203ENST00000317516 GRPRP30550 384 aa15.51■□□□□ 0.07
TPM1-203ENST00000317516 NFYCQ13952 458 aa15.51■□□□□ 0.07
TPM1-203ENST00000317516 CLEC2AQ6UVW9 174 aa15.51■□□□□ 0.07
TPM1-203ENST00000317516 B3GLCTQ6Y288 498 aa15.51■□□□□ 0.07
TPM1-203ENST00000317516 DNM1P46Q6ZS02 220 aa15.51■□□□□ 0.07
TPM1-203ENST00000317516 SLC30A8Q8IWU4 369 aa15.51■□□□□ 0.07
TPM1-203ENST00000317516 ADPRHL1Q8NDY3 354 aa15.51■□□□□ 0.07
TPM1-203ENST00000317516 PIK3C3Q8NEB9 887 aa15.51■□□□□ 0.07
TPM1-203ENST00000317516 SLC38A2Q96QD8 506 aa15.51■□□□□ 0.07
TPM1-203ENST00000317516 PRR14Q9BWN1 585 aa15.51■□□□□ 0.07
TPM1-203ENST00000317516 ASPNQ9BXN1 380 aa15.51■□□□□ 0.07
TPM1-203ENST00000317516 RSPO3Q9BXY4 272 aaPredicted RBP15.51■□□□□ 0.07
TPM1-203ENST00000317516 NPHS2Q9NP85 383 aa15.51■□□□□ 0.07
TPM1-203ENST00000317516 MRGBPQ9NV56 204 aa15.51■□□□□ 0.07
TPM1-203ENST00000317516 MOKQ9UQ07 419 aa15.51■□□□□ 0.07
TPM1-203ENST00000317516 NSD1Q96L73 2696 aaPredicted RBP15.51■□□□□ 0.07
TPM1-203ENST00000317516 TLN2Q9Y4G6 2542 aa15.5■□□□□ 0.07
TPM1-203ENST00000317516 IGKV1D-42A0A075B6H8 117 aa15.5■□□□□ 0.07
TPM1-203ENST00000317516 A0A0B4J2E0 115 aa15.5■□□□□ 0.07
TPM1-203ENST00000317516 A0A0G2JND7 137 aa15.5■□□□□ 0.07
TPM1-203ENST00000317516 A0A1B0GX12 115 aa15.5■□□□□ 0.07
TPM1-203ENST00000317516 INAFM1C9JVW0 142 aa15.5■□□□□ 0.07
TPM1-203ENST00000317516 ATP6V1G2-DDX39BF2Z307 99 aa15.5■□□□□ 0.07
TPM1-203ENST00000317516 H7C417 338 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms