RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 FBXL2Q9UKC9 423 aa15.12■□□□□ 0.01
CLCF1-201ENST00000312438 CAB39Q9Y376 341 aaPredicted RBP15.12■□□□□ 0.01
CLCF1-201ENST00000312438 CORINQ9Y5Q5 1042 aa15.12■□□□□ 0.01
CLCF1-201ENST00000312438 SPAARA0A1B0GVQ0 90 aa15.11■□□□□ 0.01
CLCF1-201ENST00000312438 DAPL1A0PJW8 107 aa15.11■□□□□ 0.01
CLCF1-201ENST00000312438 ANKRD33BA6NCL7 494 aa15.11■□□□□ 0.01
CLCF1-201ENST00000312438 FKBP2P26885 142 aaKnown RBP15.11■□□□□ 0.01
CLCF1-201ENST00000312438 ADH6P28332 368 aa15.11■□□□□ 0.01
CLCF1-201ENST00000312438 GRPRP30550 384 aa15.11■□□□□ 0.01
CLCF1-201ENST00000312438 EIF1P41567 113 aaKnown RBP15.11■□□□□ 0.01
CLCF1-201ENST00000312438 DIO1P49895 249 aa15.11■□□□□ 0.01
CLCF1-201ENST00000312438 SLC25A1P53007 311 aa15.11■□□□□ 0.01
CLCF1-201ENST00000312438 ACSM1Q08AH1 577 aa15.11■□□□□ 0.01
CLCF1-201ENST00000312438 TPBGQ13641 420 aa15.11■□□□□ 0.01
CLCF1-201ENST00000312438 GALEQ14376 348 aa15.11■□□□□ 0.01
CLCF1-201ENST00000312438 DGUOKQ16854 277 aa15.11■□□□□ 0.01
CLCF1-201ENST00000312438 LCN1P1Q5VSP4 162 aa15.11■□□□□ 0.01
CLCF1-201ENST00000312438 LEG1Q6P5S2 330 aa15.11■□□□□ 0.01
CLCF1-201ENST00000312438 GDPGP1Q6ZNW5 385 aa15.11■□□□□ 0.01
CLCF1-201ENST00000312438 LSM14AQ8ND56 463 aaKnown RBP15.11■□□□□ 0.01
CLCF1-201ENST00000312438 SMPDL3BQ92485 455 aa15.11■□□□□ 0.01
CLCF1-201ENST00000312438 TM9SF4Q92544 642 aa15.11■□□□□ 0.01
CLCF1-201ENST00000312438 CHCHD6Q9BRQ6 235 aa15.11■□□□□ 0.01
CLCF1-201ENST00000312438 ADGRL4Q9HBW9 690 aa15.11■□□□□ 0.01
CLCF1-201ENST00000312438 INIPQ9NRY2 104 aa15.11■□□□□ 0.01
CLCF1-201ENST00000312438 NDUFB11Q9NX14 153 aa15.11■□□□□ 0.01
CLCF1-201ENST00000312438 SEC14L4Q9UDX3 406 aa15.11■□□□□ 0.01
CLCF1-201ENST00000312438 ZNF346Q9UL40 294 aaKnown RBP15.11■□□□□ 0.01
CLCF1-201ENST00000312438 PCDHGB7Q9Y5F8 929 aa15.11■□□□□ 0.01
CLCF1-201ENST00000312438 SPIN1Q9Y657 262 aaPredicted RBP15.11■□□□□ 0.01
CLCF1-201ENST00000312438 A0A087WZY1 265 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 LOC100506127A0A0U1RQW1 187 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 FTCDNL1E5RQL4 147 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 PLPP3O14495 311 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 RNF13O43567 381 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 SNX4O95219 450 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 CCL3P10147 92 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 AHCYP23526 432 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 GGTLC2Q14390 218 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 SLC6A19Q695T7 634 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 ZNF322Q6U7Q0 402 aaPredicted RBP15.1■□□□□ 0.01
CLCF1-201ENST00000312438 USP43Q70EL4 1123 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 POMGNT2Q8NAT1 580 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 OR10H4Q8NGA5 316 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 POC1BQ8TC44 478 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 DYNC2LI1Q8TCX1 351 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 TSPAN32Q96QS1 320 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 ASB6Q9NWX5 421 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 C11orf98E9PRG8 122 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 EFNA2O43921 213 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 SPI1P17947 270 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 CD82P27701 267 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 ACTC1P68032 377 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 ACTA1P68133 377 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 DBPQ10586 325 aaPredicted RBP15.1■□□□□ 0.01
CLCF1-201ENST00000312438 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.1■□□□□ 0.01
CLCF1-201ENST00000312438 ACER2Q5QJU3 275 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 LIPKQ5VXJ0 399 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 JMJD6Q6NYC1 403 aaPredicted RBP15.1■□□□□ 0.01
CLCF1-201ENST00000312438 TMEM99Q8N816 258 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 SCAIQ8N9R8 606 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 ZNF248Q8NDW4 579 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 ATP6V1C2Q8NEY4 427 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 SPRYD4Q8WW59 207 aaPredicted RBP15.1■□□□□ 0.01
CLCF1-201ENST00000312438 UFD1Q92890 307 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 ZBTB8AQ96BR9 441 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 ARL5BQ96KC2 179 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 IP6K3Q96PC2 410 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 ALG8Q9BVK2 526 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 DCSTAMPQ9H295 470 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 PROK2Q9HC23 129 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 MOKQ9UQ07 419 aa15.1■□□□□ 0.01
CLCF1-201ENST00000312438 WDR87Q6ZQQ6 2873 aa15.09■□□□□ 0.01
CLCF1-201ENST00000312438 AKAP8O43823 692 aaKnown RBP15.09■□□□□ 0.01
CLCF1-201ENST00000312438 SERPINI2O75830 405 aa15.09■□□□□ 0.01
CLCF1-201ENST00000312438 CLPXO76031 633 aa15.09■□□□□ 0.01
CLCF1-201ENST00000312438 MRPL3P09001 348 aaKnown RBP15.09■□□□□ 0.01
CLCF1-201ENST00000312438 TFPIP10646 304 aa15.09■□□□□ 0.01
CLCF1-201ENST00000312438 GTF2E2P29084 291 aaKnown RBP15.09■□□□□ 0.01
CLCF1-201ENST00000312438 ZP4Q12836 540 aa15.09■□□□□ 0.01
CLCF1-201ENST00000312438 DYNC1I2Q13409 638 aaKnown RBP15.09■□□□□ 0.01
CLCF1-201ENST00000312438 KRR1Q13601 381 aaKnown RBP15.09■□□□□ 0.01
CLCF1-201ENST00000312438 ZNF468Q5VIY5 522 aaPredicted RBP15.09■□□□□ 0.01
CLCF1-201ENST00000312438 B3GNTL1Q67FW5 361 aaPredicted RBP15.09■□□□□ 0.01
CLCF1-201ENST00000312438 H1FNTQ75WM6 255 aaPredicted RBP15.09■□□□□ 0.01
CLCF1-201ENST00000312438 GPALPP1Q8IXQ4 340 aa15.09■□□□□ 0.01
CLCF1-201ENST00000312438 ARIH2OSQ8N7S6 290 aa15.09■□□□□ 0.01
CLCF1-201ENST00000312438 KBTBD8Q8NFY9 601 aa15.09■□□□□ 0.01
CLCF1-201ENST00000312438 OR1J4Q8NGS1 313 aa15.09■□□□□ 0.01
CLCF1-201ENST00000312438 ZNF417Q8TAU3 575 aa15.09■□□□□ 0.01
CLCF1-201ENST00000312438 TBC1D15Q8TC07 691 aa15.09■□□□□ 0.01
CLCF1-201ENST00000312438 NKD1Q969G9 470 aa15.09■□□□□ 0.01
CLCF1-201ENST00000312438 ZMYND19Q96E35 227 aaPredicted RBP15.09■□□□□ 0.01
CLCF1-201ENST00000312438 ZNF587Q96SQ5 575 aaPredicted RBP15.09■□□□□ 0.01
CLCF1-201ENST00000312438 CENPOQ9BU64 300 aa15.09■□□□□ 0.01
CLCF1-201ENST00000312438 BABAM2Q9NXR7 383 aa15.09■□□□□ 0.01
CLCF1-201ENST00000312438 STUB1Q9UNE7 303 aa15.09■□□□□ 0.01
CLCF1-201ENST00000312438 NOX1Q9Y5S8 564 aa15.09■□□□□ 0.01
CLCF1-201ENST00000312438 MRPS18BQ9Y676 258 aaKnown RBP15.09■□□□□ 0.01
CLCF1-201ENST00000312438 SHISA8B8ZZ34 492 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms