RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 HORMAD2Q8N7B1 307 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 TCEANCQ8N8B7 351 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 OR7G1Q8NGA0 311 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 OR52N1Q8NH53 320 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 ZFAND1Q8TCF1 268 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 GNPDA2Q8TDQ7 276 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 SMPDL3AQ92484 453 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 UFD1Q92890 307 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 RFKQ969G6 155 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 TM4SF18Q96CE8 201 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 TMEM19Q96HH6 336 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 DIRAS2Q96HU8 199 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 PRRC1Q96M27 445 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 ZNF582Q96NG8 517 aaPredicted RBP4.47□□□□□ -1.69
CKS1B-201ENST00000308987 TGM7Q96PF1 710 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 IL4I1Q96RQ9 567 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 NRTNQ99748 197 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 AIF1LQ9BQI0 150 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 TMEM246Q9BRR3 403 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 MLST8Q9BVC4 326 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 NUDT9Q9BW91 350 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 PINK1Q9BXM7 581 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 MS4A8Q9BY19 250 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 ROGDIQ9GZN7 287 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 TWSG1Q9GZX9 223 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 OR2AG1Q9H205 316 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 MIXL1Q9H2W2 232 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 OR51B5Q9H339 312 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 PPP1R3EQ9H7J1 279 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 SYNPO2LQ9H987 977 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 MARCH7Q9H992 704 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 UCK1Q9HA47 277 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 ABCB9Q9NP78 766 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 LHX9Q9NQ69 397 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 SNTG1Q9NSN8 517 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 ACOXLQ9NUZ1 547 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 RBFOX1Q9NWB1 397 aaKnown RBP4.47□□□□□ -1.69
CKS1B-201ENST00000308987 C14orf119Q9NWQ9 140 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 PTTG3PQ9NZH4 202 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 CALML5Q9NZT1 146 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 RABL2AQ9UBK7 228 aaPredicted RBP4.47□□□□□ -1.69
CKS1B-201ENST00000308987 P2RX2Q9UBL9 471 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 A4GNTQ9UNA3 340 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 RABL2BQ9UNT1 228 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 NTNG1Q9Y2I2 539 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 RBMX2Q9Y388 322 aaKnown RBP4.47□□□□□ -1.69
CKS1B-201ENST00000308987 MAU2Q9Y6X3 613 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 ANKHD1Q8IWZ3 2542 aaKnown RBP4.47□□□□□ -1.69
CKS1B-201ENST00000308987 INTS1Q8N201 2190 aaKnown RBP4.47□□□□□ -1.69
CKS1B-201ENST00000308987 KIR2DS5A0A0G2JLQ3 304 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 A0A0G2JNG1 304 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 A0A1W2PQL4 384 aaPredicted RBP4.46□□□□□ -1.7
CKS1B-201ENST00000308987 KRT87PA6NCN2 255 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 ANKRD61A6NGH8 418 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 ANKDD1BA6NHY2 528 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 ARGFXA6NJG6 315 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 H3BN98 237 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 KIR2DS3K7RE56 304 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 PLPP1O14494 284 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 PLA2G10O15496 165 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 TLX2O43763 284 aaPredicted RBP4.46□□□□□ -1.7
CKS1B-201ENST00000308987 ORC5O43913 435 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 MTX2O75431 263 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 SNAPC5O75971 98 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 SCAF4O95104 1147 aaKnown RBP4.46□□□□□ -1.7
CKS1B-201ENST00000308987 HMGN1P05114 100 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 BCHEP06276 602 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 POU2F1P14859 743 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 MAGP20916 626 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 MMP11P24347 488 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 PDHA2P29803 388 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 SOX3P41225 446 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 CAPZBP47756 277 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 MTNR1AP48039 350 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 CCT3P49368 545 aaKnown RBP4.46□□□□□ -1.7
CKS1B-201ENST00000308987 PPM1FP49593 454 aaPredicted RBP4.46□□□□□ -1.7
CKS1B-201ENST00000308987 EVX1P49640 407 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 KHKP50053 298 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 CCL11P51671 97 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 PGDP52209 483 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 NKX2-5P52952 324 aaPredicted RBP4.46□□□□□ -1.7
CKS1B-201ENST00000308987 MAPK12P53778 367 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 CLDN20P56880 219 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 ARPC4P59998 168 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 REEP5Q00765 189 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 ROM1Q03395 351 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 FAPQ12884 760 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 TSPAN31Q12999 210 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 GPR18Q14330 331 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 IL11RAQ14626 422 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 GINS1Q14691 196 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 GANABQ14697 944 aaKnown RBP4.46□□□□□ -1.7
CKS1B-201ENST00000308987 KIR2DS5Q14953 304 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 TRAM1Q15629 374 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 CARTPTQ16568 116 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 CCSMST1Q4G0I0 132 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 TMEM35AQ53FP2 167 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 PYDC2Q56P42 97 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 LIPKQ5VXJ0 399 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 TRIQKQ629K1 86 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms