RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 TAS2R5Q9NYW4 299 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 BAIAP2Q9UQB8 552 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 RPH3AQ9Y2J0 694 aaPredicted RBP6.27□□□□□ -1.41
PTCD2-201ENST00000308077 CEPT1Q9Y6K0 416 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 PTPRQQ9UMZ3 2332 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 A0A087WZY1 265 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 M0R082 166 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 IMPA2O14732 288 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 PRODHO43272 600 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 CBR3O75828 277 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 AHSA1O95433 338 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 FADS2O95864 444 aaKnown RBP6.27□□□□□ -1.41
PTCD2-201ENST00000308077 MT-ATP6P00846 226 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 F13BP05160 661 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 PIPP12273 146 aaPredicted RBP6.27□□□□□ -1.41
PTCD2-201ENST00000308077 HIST1H1CP16403 213 aaKnown RBP6.27□□□□□ -1.41
PTCD2-201ENST00000308077 JUNBP17275 347 aaPredicted RBP6.27□□□□□ -1.41
PTCD2-201ENST00000308077 CNR1P21554 472 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 PAX7P23759 505 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 ADH6P28332 368 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 NOS3P29474 1203 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 RPL4P36578 427 aaKnown RBP6.27□□□□□ -1.41
PTCD2-201ENST00000308077 RRADP55042 308 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 EMX1Q04741 257 aaPredicted RBP6.27□□□□□ -1.41
PTCD2-201ENST00000308077 ST3GAL4Q11206 333 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 FOXO1Q12778 655 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 CRMP1Q14194 572 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 ALG10Q5BKT4 473 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 GTF2IRD2BQ6EKJ0 949 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 C3orf33Q6P1S2 294 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 PLBD1Q6P4A8 553 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 ARHGAP11AQ6P4F7 1023 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 C5orf46Q6UWT4 87 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 CXXC5Q7LFL8 322 aaKnown RBP6.27□□□□□ -1.41
PTCD2-201ENST00000308077 MAMDC2Q7Z304 686 aaPredicted RBP6.27□□□□□ -1.41
PTCD2-201ENST00000308077 FAM122BQ7Z309 247 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 GTF2IRD2Q86UP8 949 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 GTPBP8Q8N3Z3 284 aaPredicted RBP6.27□□□□□ -1.41
PTCD2-201ENST00000308077 CYB561A3Q8NBI2 242 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 MDS2Q8NDY4 140 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 OR5J2Q8NH18 312 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 OR6S1Q8NH40 331 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 ZNF417Q8TAU3 575 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 ZPLD1Q8TCW7 415 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 FAR1Q8WVX9 515 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 PTP4A1Q93096 173 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 ZBTB8AQ96BR9 441 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 DDIT4LQ96D03 193 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 RASD2Q96D21 266 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 Q96MT0 163 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 ZNF587Q96SQ5 575 aaPredicted RBP6.27□□□□□ -1.41
PTCD2-201ENST00000308077 KATNB1Q9BVA0 655 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 TEX12Q9BXU0 123 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 FN3KQ9H479 309 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 CCNB1IP1Q9NPC3 277 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 TIMMDC1Q9NPL8 285 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 KLHL1Q9NR64 748 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 TAS2R16Q9NYV7 291 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 CNOT2Q9NZN8 540 aaKnown RBP6.27□□□□□ -1.41
PTCD2-201ENST00000308077 ABI3Q9P2A4 366 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 DKKL1Q9UK85 242 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 PCDHGB1Q9Y5G3 927 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 SNX5Q9Y5X3 404 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 MED12Q93074 2177 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 LRRK2Q5S007 2527 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 TEX13CA0A0J9YWL9 993 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 CCDC182A6NF36 153 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 EFCAB10A6NFE3 127 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 LIPT2A6NK58 231 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 ZNF891A8MT65 544 aaPredicted RBP6.26□□□□□ -1.41
PTCD2-201ENST00000308077 FAM47E-STBD1D6RA91 191 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 C11orf98E9PRG8 122 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 ARPC3O15145 178 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 OR2T1O43869 369 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 MRPS14O60783 128 aaKnown RBP6.26□□□□□ -1.41
PTCD2-201ENST00000308077 FZD7O75084 574 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 APOL3O95236 402 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 HIST1H2ABP04908 130 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 CD14P08571 375 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 TFPIP10646 304 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 CLUP10909 449 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 CASRP41180 1078 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 EIF1P41567 113 aaKnown RBP6.26□□□□□ -1.41
PTCD2-201ENST00000308077 CDH11P55287 796 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 B3GALT5-AS1P59052 145 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 CTXN1P60606 82 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.26□□□□□ -1.41
PTCD2-201ENST00000308077 SELENBP1Q13228 472 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 ITGADQ13349 1161 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 DOC2BQ14184 412 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 LY6DQ14210 128 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 IRF3Q14653 427 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 RAB39AQ14964 217 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 OR7A5Q15622 319 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 SGCBQ16585 318 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 ANKDD1AQ495B1 522 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 GLYR1Q49A26 553 aaPredicted RBP6.26□□□□□ -1.41
PTCD2-201ENST00000308077 CRTC2Q53ET0 693 aaPredicted RBP6.26□□□□□ -1.41
PTCD2-201ENST00000308077 AGAP7PQ5VUJ5 663 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 NXNL2Q5VZ03 156 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms