RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 KDM4DQ6B0I6 523 aa24.23■■□□□ 1.47
HDAC3-201ENST00000305264 ABLIM2Q6H8Q1 611 aa24.23■■□□□ 1.47
HDAC3-201ENST00000305264 ZBTB49Q6ZSB9 765 aa24.23■■□□□ 1.47
HDAC3-201ENST00000305264 KIF18BQ86Y91 864 aa24.23■■□□□ 1.47
HDAC3-201ENST00000305264 MOSPD2Q8NHP6 518 aa24.23■■□□□ 1.47
HDAC3-201ENST00000305264 RNF128Q8TEB7 428 aa24.23■■□□□ 1.47
HDAC3-201ENST00000305264 ABHD3Q8WU67 409 aa24.23■■□□□ 1.47
HDAC3-201ENST00000305264 NRG4Q8WWG1 115 aa24.23■■□□□ 1.47
HDAC3-201ENST00000305264 NAA11Q9BSU3 229 aaPredicted RBP24.23■■□□□ 1.47
HDAC3-201ENST00000305264 UCK2Q9BZX2 261 aa24.23■■□□□ 1.47
HDAC3-201ENST00000305264 ZNF556Q9HAH1 456 aa24.23■■□□□ 1.47
HDAC3-201ENST00000305264 ZNF175Q9Y473 711 aa24.23■■□□□ 1.47
HDAC3-201ENST00000305264 MED12LQ86YW9 2145 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 MITFO75030 526 aaPredicted RBP24.22■■□□□ 1.47
HDAC3-201ENST00000305264 SOX14O95416 240 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 HPRP00739 348 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 ALPLP05186 524 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 TSPAN19P0C672 248 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 ADORA3P0DMS8 318 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 RPL18Q07020 188 aaKnown RBP24.22■■□□□ 1.47
HDAC3-201ENST00000305264 DAG1Q14118 895 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 CD300LDQ6UXZ3 194 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 ZNF620Q6ZNG0 422 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 ADPRHL1Q8NDY3 354 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 FANK1Q8TC84 345 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 RBM4BQ9BQ04 359 aaKnown RBP24.22■■□□□ 1.47
HDAC3-201ENST00000305264 RBM4Q9BWF3 364 aaKnown RBP24.22■■□□□ 1.47
HDAC3-201ENST00000305264 TP63Q9H3D4 680 aaPredicted RBP24.22■■□□□ 1.47
HDAC3-201ENST00000305264 ZNF462Q96JM2 2506 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 DOCK7Q96N67 2140 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 MS4A18H0YCH9 400 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 PTP4A3O75365 173 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 TP53P04637 393 aaPredicted RBP24.22■■□□□ 1.47
HDAC3-201ENST00000305264 PUDPQ08623 228 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 IGFBP7Q16270 282 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 MS4A18Q3C1V0 323 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 C1orf185Q5T7R7 199 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 GALNT5Q7Z7M9 940 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 MAGEE2Q8TD90 523 aaPredicted RBP24.22■■□□□ 1.47
HDAC3-201ENST00000305264 PRRG4Q9BZD6 226 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 EGLN3Q9H6Z9 239 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 KRT84Q9NSB2 600 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 B3GAT1Q9P2W7 334 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 REV1Q9UBZ9 1251 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 IL20RAQ9UHF4 553 aa24.22■■□□□ 1.47
HDAC3-201ENST00000305264 C11orf98E9PRG8 122 aa24.21■■□□□ 1.47
HDAC3-201ENST00000305264 IGFBP1P08833 259 aaPredicted RBP24.21■■□□□ 1.47
HDAC3-201ENST00000305264 GSTM3P21266 225 aa24.21■■□□□ 1.47
HDAC3-201ENST00000305264 IGFBP5P24593 272 aa24.21■■□□□ 1.47
HDAC3-201ENST00000305264 IL1RL1Q01638 556 aa24.21■■□□□ 1.47
HDAC3-201ENST00000305264 NSUN5P2Q63ZY6 315 aa24.21■■□□□ 1.47
HDAC3-201ENST00000305264 GPAT4Q86UL3 456 aa24.21■■□□□ 1.47
HDAC3-201ENST00000305264 PAPOLBQ9NRJ5 636 aaKnown RBP24.21■■□□□ 1.47
HDAC3-201ENST00000305264 USE1Q9NZ43 259 aa24.21■■□□□ 1.47
HDAC3-201ENST00000305264 EIF4E1BA6NMX2 242 aaKnown RBP24.2■■□□□ 1.46
HDAC3-201ENST00000305264 CYTIPO60759 359 aa24.2■■□□□ 1.46
HDAC3-201ENST00000305264 AHCYP23526 432 aa24.2■■□□□ 1.46
HDAC3-201ENST00000305264 PTGER4P35408 488 aa24.2■■□□□ 1.46
HDAC3-201ENST00000305264 ALDH3A2P51648 485 aa24.2■■□□□ 1.46
HDAC3-201ENST00000305264 THSD4Q6ZMP0 1018 aa24.2■■□□□ 1.46
HDAC3-201ENST00000305264 RASSF6Q6ZTQ3 369 aa24.2■■□□□ 1.46
HDAC3-201ENST00000305264 SEM1Q6ZVN7 128 aa24.2■■□□□ 1.46
HDAC3-201ENST00000305264 PLA2G12AQ9BZM1 189 aa24.2■■□□□ 1.46
HDAC3-201ENST00000305264 ENKD1Q9H0I2 346 aa24.2■■□□□ 1.46
HDAC3-201ENST00000305264 OR52D1Q9H346 318 aa24.2■■□□□ 1.46
HDAC3-201ENST00000305264 POFUT2Q9Y2G5 429 aa24.2■■□□□ 1.46
HDAC3-201ENST00000305264 COX10Q12887 443 aa24.2■■□□□ 1.46
HDAC3-201ENST00000305264 TMEM225Q6GV28 225 aa24.2■■□□□ 1.46
HDAC3-201ENST00000305264 IGFN1Q86VF2 1251 aa24.2■■□□□ 1.46
HDAC3-201ENST00000305264 CALHM2Q9HA72 323 aa24.2■■□□□ 1.46
HDAC3-201ENST00000305264 OSGIN2Q9Y236 505 aa24.2■■□□□ 1.46
HDAC3-201ENST00000305264 CDH10Q9Y6N8 788 aa24.2■■□□□ 1.46
HDAC3-201ENST00000305264 A0A1W2PNV4 684 aa24.19■■□□□ 1.46
HDAC3-201ENST00000305264 CD8B2A6NJW9 211 aa24.19■■□□□ 1.46
HDAC3-201ENST00000305264 OR6A2O95222 327 aa24.19■■□□□ 1.46
HDAC3-201ENST00000305264 F13BP05160 661 aa24.19■■□□□ 1.46
HDAC3-201ENST00000305264 HLA-DOBP13765 273 aa24.19■■□□□ 1.46
HDAC3-201ENST00000305264 SF3B4Q15427 424 aaKnown RBP eCLIP24.19■■□□□ 1.462e-7■■■■■ 49
HDAC3-201ENST00000305264 SMARCD3Q6STE5 483 aa24.19■■□□□ 1.46
HDAC3-201ENST00000305264 P4HA3Q7Z4N8 544 aa24.19■■□□□ 1.46
HDAC3-201ENST00000305264 C9orf106Q8NAJ2 232 aa24.19■■□□□ 1.46
HDAC3-201ENST00000305264 DNAJC9Q8WXX5 260 aa24.19■■□□□ 1.46
HDAC3-201ENST00000305264 ING1Q9UK53 422 aaPredicted RBP24.19■■□□□ 1.46
HDAC3-201ENST00000305264 RASD1Q9Y272 281 aa24.19■■□□□ 1.46
HDAC3-201ENST00000305264 ZNF716A6NP11 495 aa24.18■■□□□ 1.46
HDAC3-201ENST00000305264 RNF13O43567 381 aa24.18■■□□□ 1.46
HDAC3-201ENST00000305264 SERPINI2O75830 405 aa24.18■■□□□ 1.46
HDAC3-201ENST00000305264 FCGR2AP12318 317 aa24.18■■□□□ 1.46
HDAC3-201ENST00000305264 SLC17A1Q14916 467 aa24.18■■□□□ 1.46
HDAC3-201ENST00000305264 ANKDD1AQ495B1 522 aa24.18■■□□□ 1.46
HDAC3-201ENST00000305264 SLC36A3Q495N2 470 aa24.18■■□□□ 1.46
HDAC3-201ENST00000305264 ALG10Q5BKT4 473 aa24.18■■□□□ 1.46
HDAC3-201ENST00000305264 B3GNT6Q6ZMB0 384 aa24.18■■□□□ 1.46
HDAC3-201ENST00000305264 GALNT4Q8N4A0 578 aa24.18■■□□□ 1.46
HDAC3-201ENST00000305264 LRRC75AQ8NAA5 344 aa24.18■■□□□ 1.46
HDAC3-201ENST00000305264 OR8D4Q8NGM9 314 aa24.18■■□□□ 1.46
HDAC3-201ENST00000305264 RNF122Q9H9V4 155 aa24.18■■□□□ 1.46
HDAC3-201ENST00000305264 PHF3Q92576 2039 aaKnown RBP24.18■■□□□ 1.46
HDAC3-201ENST00000305264 TRGV8A0A0C4DH27 118 aa24.18■■□□□ 1.46
HDAC3-201ENST00000305264 MCIDASD6RGH6 385 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms