RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 GID8Q9NWU2 228 aa23.22■■□□□ 1.31
CDKN2A-201ENST00000304494 RCE1Q9Y256 329 aa23.22■■□□□ 1.31
CDKN2A-201ENST00000304494 CORINQ9Y5Q5 1042 aa23.22■■□□□ 1.31
CDKN2A-201ENST00000304494 MAGED1Q9Y5V3 778 aaPredicted RBP23.22■■□□□ 1.31
CDKN2A-201ENST00000304494 DSCAMO60469 2012 aa23.21■■□□□ 1.31
CDKN2A-201ENST00000304494 ZNF587BE7ETH6 402 aa23.21■■□□□ 1.31
CDKN2A-201ENST00000304494 M0R082 166 aa23.21■■□□□ 1.31
CDKN2A-201ENST00000304494 FXYD1O00168 92 aa23.21■■□□□ 1.31
CDKN2A-201ENST00000304494 ZNF83P51522 516 aa23.21■■□□□ 1.31
CDKN2A-201ENST00000304494 C1DQ13901 141 aaKnown RBP23.21■■□□□ 1.31
CDKN2A-201ENST00000304494 RABL3Q5HYI8 236 aa23.21■■□□□ 1.31
CDKN2A-201ENST00000304494 CCDC80Q76M96 950 aa23.21■■□□□ 1.31
CDKN2A-201ENST00000304494 YTHDF3Q7Z739 585 aaKnown RBP23.21■■□□□ 1.31
CDKN2A-201ENST00000304494 KDM8Q8N371 416 aa23.21■■□□□ 1.31
CDKN2A-201ENST00000304494 ADPRHL1Q8NDY3 354 aa23.21■■□□□ 1.31
CDKN2A-201ENST00000304494 ZNF417Q8TAU3 575 aa23.21■■□□□ 1.31
CDKN2A-201ENST00000304494 BOD1Q96IK1 185 aa23.21■■□□□ 1.31
CDKN2A-201ENST00000304494 ZNF587Q96SQ5 575 aaPredicted RBP23.21■■□□□ 1.31
CDKN2A-201ENST00000304494 TMEM43Q9BTV4 400 aa23.21■■□□□ 1.31
CDKN2A-201ENST00000304494 ZNF701Q9NV72 531 aaPredicted RBP23.21■■□□□ 1.31
CDKN2A-201ENST00000304494 CAPN7Q9Y6W3 813 aa23.21■■□□□ 1.31
CDKN2A-201ENST00000304494 LOC100653049A0A140TA62 436 aa23.2■■□□□ 1.3
CDKN2A-201ENST00000304494 LOC102725191A0A1B0GVB3 256 aa23.2■■□□□ 1.3
CDKN2A-201ENST00000304494 A0A1W2PR80 420 aa23.2■■□□□ 1.3
CDKN2A-201ENST00000304494 ATP8B1O43520 1251 aa23.2■■□□□ 1.3
CDKN2A-201ENST00000304494 KRT34O76011 436 aa23.2■■□□□ 1.3
CDKN2A-201ENST00000304494 GRPRP30550 384 aa23.2■■□□□ 1.3
CDKN2A-201ENST00000304494 KLHL24Q6TFL4 600 aa23.2■■□□□ 1.3
CDKN2A-201ENST00000304494 CALHM3Q86XJ0 350 aa23.2■■□□□ 1.3
CDKN2A-201ENST00000304494 WDR31Q8NA23 367 aa23.2■■□□□ 1.3
CDKN2A-201ENST00000304494 OR6T1Q8NGN1 323 aa23.2■■□□□ 1.3
CDKN2A-201ENST00000304494 NEUROG1Q92886 237 aa23.2■■□□□ 1.3
CDKN2A-201ENST00000304494 TAMM41Q96BW9 452 aa23.2■■□□□ 1.3
CDKN2A-201ENST00000304494 C18orf12Q96KH6 178 aa23.2■■□□□ 1.3
CDKN2A-201ENST00000304494 ASPNQ9BXN1 380 aa23.2■■□□□ 1.3
CDKN2A-201ENST00000304494 LINC00470Q9BZP3 86 aa23.2■■□□□ 1.3
CDKN2A-201ENST00000304494 FAIMQ9NVQ4 179 aa23.2■■□□□ 1.3
CDKN2A-201ENST00000304494 CISD1Q9NZ45 108 aaKnown RBP23.2■■□□□ 1.3
CDKN2A-201ENST00000304494 SEC14L4Q9UDX3 406 aa23.2■■□□□ 1.3
CDKN2A-201ENST00000304494 PRR14LQ5THK1 2151 aa23.19■■□□□ 1.3
CDKN2A-201ENST00000304494 SHISA9B4DS77 424 aa23.19■■□□□ 1.3
CDKN2A-201ENST00000304494 CHP2O43745 196 aa23.19■■□□□ 1.3
CDKN2A-201ENST00000304494 AKAP8O43823 692 aaKnown RBP23.19■■□□□ 1.3
CDKN2A-201ENST00000304494 WNT11O96014 354 aa23.19■■□□□ 1.3
CDKN2A-201ENST00000304494 DANCRP0C864 163 aa23.19■■□□□ 1.3
CDKN2A-201ENST00000304494 NQO1P15559 274 aaKnown RBP23.19■■□□□ 1.3
CDKN2A-201ENST00000304494 CDH2P19022 906 aaPredicted RBP23.19■■□□□ 1.3
CDKN2A-201ENST00000304494 CD247P20963 164 aa23.19■■□□□ 1.3
CDKN2A-201ENST00000304494 CDH11P55287 796 aa23.19■■□□□ 1.3
CDKN2A-201ENST00000304494 CLDN17P56750 224 aa23.19■■□□□ 1.3
CDKN2A-201ENST00000304494 PRPS1P60891 318 aa23.19■■□□□ 1.3
CDKN2A-201ENST00000304494 IL1RL1Q01638 556 aa23.19■■□□□ 1.3
CDKN2A-201ENST00000304494 ENTPD8Q5MY95 495 aa23.19■■□□□ 1.3
CDKN2A-201ENST00000304494 ERICH5Q6P6B1 374 aa23.19■■□□□ 1.3
CDKN2A-201ENST00000304494 DEPDC4Q8N2C3 294 aa23.19■■□□□ 1.3
CDKN2A-201ENST00000304494 SCAIQ8N9R8 606 aa23.19■■□□□ 1.3
CDKN2A-201ENST00000304494 B3GAT1Q9P2W7 334 aa23.19■■□□□ 1.3
CDKN2A-201ENST00000304494 CPSF4LA6NMK7 179 aaKnown RBP23.18■■□□□ 1.3
CDKN2A-201ENST00000304494 M0R1B8 84 aa23.18■■□□□ 1.3
CDKN2A-201ENST00000304494 SLC43A1O75387 559 aa23.18■■□□□ 1.3
CDKN2A-201ENST00000304494 CBLP22681 906 aa23.18■■□□□ 1.3
CDKN2A-201ENST00000304494 CD40P25942 277 aa23.18■■□□□ 1.3
CDKN2A-201ENST00000304494 VEZF1Q14119 521 aa23.18■■□□□ 1.3
CDKN2A-201ENST00000304494 NPTX1Q15818 432 aa23.18■■□□□ 1.3
CDKN2A-201ENST00000304494 SLC22A25Q6T423 547 aa23.18■■□□□ 1.3
CDKN2A-201ENST00000304494 VANGL1Q8TAA9 524 aaPredicted RBP23.18■■□□□ 1.3
CDKN2A-201ENST00000304494 C10orf82Q8WW14 230 aa23.18■■□□□ 1.3
CDKN2A-201ENST00000304494 SLC41A3Q96GZ6 507 aa23.18■■□□□ 1.3
CDKN2A-201ENST00000304494 ZNF317Q96PQ6 595 aaPredicted RBP23.18■■□□□ 1.3
CDKN2A-201ENST00000304494 ALKBH3Q96Q83 286 aaPredicted RBP23.18■■□□□ 1.3
CDKN2A-201ENST00000304494 OBP2BQ9NPH6 170 aa23.18■■□□□ 1.3
CDKN2A-201ENST00000304494 BGLAPP02818 100 aa23.17■■□□□ 1.3
CDKN2A-201ENST00000304494 SOD3P08294 240 aa23.17■■□□□ 1.3
CDKN2A-201ENST00000304494 PAX7P23759 505 aa23.17■■□□□ 1.3
CDKN2A-201ENST00000304494 LINC00114Q6XXX2 140 aa23.17■■□□□ 1.3
CDKN2A-201ENST00000304494 C10orf53Q8N6V4 93 aa23.17■■□□□ 1.3
CDKN2A-201ENST00000304494 ANKK1Q8NFD2 765 aa23.17■■□□□ 1.3
CDKN2A-201ENST00000304494 ADAMTS16Q8TE57 1224 aa23.17■■□□□ 1.3
CDKN2A-201ENST00000304494 PROX1Q92786 737 aa23.17■■□□□ 1.3
CDKN2A-201ENST00000304494 TRMT61AQ96FX7 289 aaKnown RBP23.17■■□□□ 1.3
CDKN2A-201ENST00000304494 Q96MF0 132 aa23.17■■□□□ 1.3
CDKN2A-201ENST00000304494 POU2F3Q9UKI9 436 aa23.17■■□□□ 1.3
CDKN2A-201ENST00000304494 UPK3AO75631 287 aa23.16■■□□□ 1.3
CDKN2A-201ENST00000304494 ZNF432O94892 652 aa23.16■■□□□ 1.3
CDKN2A-201ENST00000304494 MT-ATP6P00846 226 aa23.16■■□□□ 1.3
CDKN2A-201ENST00000304494 IFNA14P01570 189 aa23.16■■□□□ 1.3
CDKN2A-201ENST00000304494 SH3BGRP55822 239 aaPredicted RBP23.16■■□□□ 1.3
CDKN2A-201ENST00000304494 ATP5J2P56134 94 aa23.16■■□□□ 1.3
CDKN2A-201ENST00000304494 LGALS3BPQ08380 585 aa23.16■■□□□ 1.3
CDKN2A-201ENST00000304494 PGGHGQ32M88 737 aa23.16■■□□□ 1.3
CDKN2A-201ENST00000304494 HMBOX1Q6NT76 420 aa23.16■■□□□ 1.3
CDKN2A-201ENST00000304494 BIVMQ86UB2 503 aa23.16■■□□□ 1.3
CDKN2A-201ENST00000304494 UEVLDQ8IX04 471 aa23.16■■□□□ 1.3
CDKN2A-201ENST00000304494 OR1K1Q8NGR3 316 aa23.16■■□□□ 1.3
CDKN2A-201ENST00000304494 GTPBP3Q969Y2 492 aaKnown RBP23.16■■□□□ 1.3
CDKN2A-201ENST00000304494 BDH2Q9BUT1 245 aa23.16■■□□□ 1.3
CDKN2A-201ENST00000304494 C1QTNF6Q9BXI9 259 aa23.16■■□□□ 1.3
CDKN2A-201ENST00000304494 PCDHAC1Q9H158 963 aa23.16■■□□□ 1.3
CDKN2A-201ENST00000304494 ALG2Q9H553 416 aa23.16■■□□□ 1.3
CDKN2A-201ENST00000304494 MRPL39Q9NYK5 338 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms