RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 RPL22L1Q6P5R6 122 aaKnown RBP13.46□□□□□ -0.25
COL6A2-201ENST00000300527 FOXN4Q96NZ1 517 aa13.46□□□□□ -0.25
COL6A2-201ENST00000300527 PCBD2Q9H0N5 130 aa13.46□□□□□ -0.25
COL6A2-201ENST00000300527 SLC6A5Q9Y345 797 aa13.46□□□□□ -0.25
COL6A2-201ENST00000300527 ANAPC1Q9H1A4 1944 aa13.46□□□□□ -0.26
COL6A2-201ENST00000300527 TBC1D3EA0A087X179 549 aa13.46□□□□□ -0.26
COL6A2-201ENST00000300527 SPINT1O43278 529 aa13.46□□□□□ -0.26
COL6A2-201ENST00000300527 CD3DP04234 171 aa13.46□□□□□ -0.26
COL6A2-201ENST00000300527 ZNF888P0CJ79 500 aaPredicted RBP13.46□□□□□ -0.26
COL6A2-201ENST00000300527 ADRB3P13945 408 aa13.46□□□□□ -0.26
COL6A2-201ENST00000300527 GABRA3P34903 492 aa13.46□□□□□ -0.26
COL6A2-201ENST00000300527 SERTAD2Q14140 314 aa13.46□□□□□ -0.26
COL6A2-201ENST00000300527 RBMS2Q15434 407 aaKnown RBP13.46□□□□□ -0.26
COL6A2-201ENST00000300527 ZCCHC12Q6PEW1 402 aa13.46□□□□□ -0.26
COL6A2-201ENST00000300527 NRROSQ86YC3 692 aa13.46□□□□□ -0.26
COL6A2-201ENST00000300527 LRRC25Q8N386 305 aaPredicted RBP13.46□□□□□ -0.26
COL6A2-201ENST00000300527 OR2L5Q8NG80 312 aa13.46□□□□□ -0.26
COL6A2-201ENST00000300527 Q96M85 177 aa13.46□□□□□ -0.26
COL6A2-201ENST00000300527 EPHX3Q9H6B9 360 aa13.46□□□□□ -0.26
COL6A2-201ENST00000300527 ZNF223Q9UK11 482 aaPredicted RBP13.46□□□□□ -0.26
COL6A2-201ENST00000300527 ADAM29Q9UKF5 820 aa13.46□□□□□ -0.26
COL6A2-201ENST00000300527 EDARQ9UNE0 448 aa13.46□□□□□ -0.26
COL6A2-201ENST00000300527 NOP16Q9Y3C1 178 aaKnown RBP13.46□□□□□ -0.26
COL6A2-201ENST00000300527 MCIDASD6RGH6 385 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 OR2A4O95047 310 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 HPP00738 406 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 HOXD10P28358 340 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 ACTA2P62736 377 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 ACTG2P63267 376 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 GUCA2BQ16661 112 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 PRRT3Q5FWE3 981 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 TMEM17Q86X19 198 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 NXPE3Q969Y0 559 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 MS4A4EQ96PG1 132 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 OR2A7Q96R45 310 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 SRA1Q9HD15 236 aaKnown RBP13.45□□□□□ -0.26
COL6A2-201ENST00000300527 GXYLT2A0PJZ3 443 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 TMEM72A0PK05 275 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 F5H0A9 414 aaPredicted RBP13.45□□□□□ -0.26
COL6A2-201ENST00000300527 CPN1P15169 458 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 CD53P19397 219 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 MST1P26927 711 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 EPHA4P54764 986 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 GPR85P60893 370 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 UBXN2BQ14CS0 331 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 NKPD1Q17RQ9 610 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 IGSF11Q5DX21 431 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 ELFN2Q5R3F8 820 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 DCST2Q5T1A1 773 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 ZNF627Q7L945 461 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 KRT77Q7Z794 578 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 ZAR1Q86SH2 424 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 ZNF676Q8N7Q3 588 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 OR4E2Q8NGC2 313 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 NKD1Q969G9 470 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 FAM83CQ9BQN1 747 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 IFT22Q9H7X7 185 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 ANKRD10Q9NXR5 420 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 COMMD9Q9P000 198 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 KIF26AQ9ULI4 1882 aaPredicted RBP13.45□□□□□ -0.26
COL6A2-201ENST00000300527 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 C17orf113A0A1B0GUU1 675 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 BLOC1S5-TXNDC5H3BN57 136 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 H7C1C5 153 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 CTDSPLO15194 276 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 DOK2O60496 412 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 PTP4A3O75365 173 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 PRNPP04156 253 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 EFNB2P52799 333 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 LCN6P62502 163 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 PPP2CBP62714 309 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 PPP2CAP67775 309 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 ALG10BQ5I7T1 473 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 RD3Q7Z3Z2 195 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 KREMEN2Q8NCW0 462 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 HERVK_113Q902F9 699 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 MOAP1Q96BY2 351 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 GIMAP5Q96F15 307 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 JAM3Q9BX67 310 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 POFUT1Q9H488 388 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 PRSS16Q9NQE7 514 aa13.45□□□□□ -0.26
COL6A2-201ENST00000300527 TMEM272A0A1B0GTI8 110 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 A0A1B0GWA3 101 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 SNRPGP15A8MWD9 76 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 KCNJ13O60928 360 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 B2MP61769 119 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 C12orf40Q86WS4 652 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 OR10AC1Q8NH08 325 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 ADAD1Q96M93 576 aaKnown RBP13.44□□□□□ -0.26
COL6A2-201ENST00000300527 CMSS1Q9BQ75 279 aaKnown RBP13.44□□□□□ -0.26
COL6A2-201ENST00000300527 DNTTIP1Q9H147 329 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 WDR13Q9H1Z4 485 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 TREM1Q9NP99 234 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 KCNE5Q9UJ90 142 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 ZNF281Q9Y2X9 895 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 GON4LQ3T8J9 2241 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 OR2AT4A6NND4 320 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 OGG1O15527 345 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 OR2T7P0C7T2 308 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 DDX6P26196 483 aaKnown RBP eCLIP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms