RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 A0A1W2PQL4 384 aaPredicted RBP8.3□□□□□ -1.08
PDPN-201ENST00000294489 C9J4A7 227 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 J3QLW9 94 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 IMPA2O14732 288 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 TERTO14746 1132 aaKnown RBP8.3□□□□□ -1.08
PDPN-201ENST00000294489 LRRTM2O43300 516 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 TBX1O43435 398 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 RNF13O43567 381 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 SERPINI2O75830 405 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 GAAP10253 952 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 ZNF19P17023 458 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 POLR2HP52434 150 aaKnown RBP8.3□□□□□ -1.08
PDPN-201ENST00000294489 ACTA2P62736 377 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 ACTG2P63267 376 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 DBPQ10586 325 aaPredicted RBP8.3□□□□□ -1.08
PDPN-201ENST00000294489 IL10RAQ13651 578 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 GGTLC2Q14390 218 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 OXA1LQ15070 435 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 TRAM1Q15629 374 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 TOMM34Q15785 309 aaPredicted RBP8.3□□□□□ -1.08
PDPN-201ENST00000294489 ARIH2OSQ8N7S6 290 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 NEIL3Q8TAT5 605 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 DUSP19Q8WTR2 217 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 THAP3Q8WTV1 239 aaPredicted RBP8.3□□□□□ -1.08
PDPN-201ENST00000294489 MR1Q95460 341 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 RASD2Q96D21 266 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 C4orf36Q96KX1 117 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 QPCTLQ9NXS2 382 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 MYOTQ9UBF9 498 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 UGT2A1Q9Y4X1 527 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 HS3ST3B1Q9Y662 390 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 MYO15AQ9UKN7 3530 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 TRAV36DV7A0A075B6V5 113 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 RGS9O75916 674 aaPredicted RBP8.29□□□□□ -1.08
PDPN-201ENST00000294489 STK17BO94768 372 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 SPI1P17947 270 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 F8A1P23610 371 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 SDHAP31040 664 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 TNFSF8P32971 234 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 RPS5P46782 204 aaKnown RBP8.29□□□□□ -1.08
PDPN-201ENST00000294489 DIO1P49895 249 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 EIF3IQ13347 325 aaKnown RBP8.29□□□□□ -1.08
PDPN-201ENST00000294489 QPRTQ15274 297 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 EXT1Q16394 746 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 EMC4Q5J8M3 183 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 LEG1Q6P5S2 330 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 GRINAQ7Z429 371 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 OR51L1Q8NGJ5 315 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 OR6K6Q8NGW6 343 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 GPR119Q8TDV5 335 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 TMEM234Q8WY98 164 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 TAAR8Q969N4 342 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 PPP1R14BQ96C90 147 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 Q96M85 177 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 TIMP4Q99727 224 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 TAS2R10Q9NYW0 307 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 GRHPRQ9UBQ7 328 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 CMAHPQ9Y471 501 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 OR6C68A6NDL8 312 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 FZD7O75084 574 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 MT-ATP6P00846 226 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 UQCRC1P31930 480 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 PTGDSP41222 190 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 HTR3AP46098 478 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 SUMO3P55854 103 aaPredicted RBP8.29□□□□□ -1.08
PDPN-201ENST00000294489 ZNF85Q03923 595 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 C17orf67Q0P5P2 114 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 TCF15Q12870 199 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 NTRK2Q16620 822 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 C6orf15Q6UXA7 325 aaPredicted RBP8.29□□□□□ -1.08
PDPN-201ENST00000294489 PLEKHG7Q6ZR37 379 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 RAB11FIP2Q7L804 512 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 VASH1Q7L8A9 365 aaPredicted RBP8.29□□□□□ -1.08
PDPN-201ENST00000294489 SYT14Q8NB59 555 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 C8orf44Q96CB5 159 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 FRMD6Q96NE9 622 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 PARD6AQ9NPB6 346 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 WDR70Q9NW82 654 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 NCOR1O75376 2440 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 CD8B2A6NJW9 211 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 B4DXG7 233 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 C9orf172C9J069 976 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 PLPP2O43688 288 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 SUSD5O60279 629 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 SNX4O95219 450 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 CLEC2LP0C7M8 214 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 CD8BP10966 210 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 TMED10P49755 219 aaKnown RBP8.29□□□□□ -1.08
PDPN-201ENST00000294489 OR12D2P58182 307 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 LTBQ06643 244 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 RPL18Q07020 188 aaKnown RBP8.29□□□□□ -1.08
PDPN-201ENST00000294489 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.29□□□□□ -1.08
PDPN-201ENST00000294489 DDI2Q5TDH0 399 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 GPR139Q6DWJ6 353 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 ARL9Q6T311 187 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 C16orf47Q6ZP98 133 aaPredicted RBP8.29□□□□□ -1.08
PDPN-201ENST00000294489 MAMDC2Q7Z304 686 aaPredicted RBP8.29□□□□□ -1.08
PDPN-201ENST00000294489 FAM122BQ7Z309 247 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 TIPARPQ7Z3E1 657 aaKnown RBP8.29□□□□□ -1.08
PDPN-201ENST00000294489 SLC35F2Q8IXU6 374 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms