RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 BRD7Q9NPI1 651 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 KLK13Q9UKR3 277 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 CES1P1Q9UKY3 287 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 GPR55Q9Y2T6 319 aaPredicted RBP9.47□□□□□ -0.89
UPF3B-201ENST00000276201 SPEGQ15772 3267 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 ASXL3Q9C0F0 2248 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 PTPRBP23467 1997 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 A0A1B0GW55 424 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 CPED1A4D0V7 1026 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 DUXAA6NLW8 204 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 GPR89AB7ZAQ6 455 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 E9PI62 339 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 PDCD5O14737 125 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 KRT33AO76009 404 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 GPR89BP0CG08 455 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 DUX4L2P0CJ85 424 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 DUX4L3P0CJ86 424 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 DUX4L4P0CJ87 422 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 DUX4L5P0CJ88 424 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 DUX4L6P0CJ89 424 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 DUX4L7P0CJ90 424 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 RAB3AP20336 220 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 TBXA2RP21731 343 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 S100A11P31949 105 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 ACTR1BP42025 376 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 GPR4P46093 362 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 RGS8P57771 180 aaPredicted RBP9.46□□□□□ -0.89
UPF3B-201ENST00000276201 ACTR1AP61163 376 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 E2F1Q01094 437 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 HLXQ14774 488 aaPredicted RBP9.46□□□□□ -0.89
UPF3B-201ENST00000276201 FAM180BQ6P0A1 224 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 TMPRSS11FQ6ZWK6 438 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 CHMP1BQ7LBR1 199 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 STPG2Q8N412 459 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 PNPLA2Q96AD5 504 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 ORAI1Q96D31 301 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 TEAD3Q99594 435 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 MENTQ9BUN1 341 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 SCNM1Q9BWG6 230 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 MTHFD2LQ9H903 347 aaPredicted RBP9.46□□□□□ -0.89
UPF3B-201ENST00000276201 IFT46Q9NQC8 304 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 KLHL9Q9P2J3 617 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 DUX4Q9UBX2 424 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 ZNF443Q9Y2A4 671 aaPredicted RBP9.46□□□□□ -0.89
UPF3B-201ENST00000276201 SLC35A3Q9Y2D2 325 aa9.46□□□□□ -0.89
UPF3B-201ENST00000276201 AGRPO00253 132 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 GPRIN2O60269 458 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 POP7O75817 140 aaKnown RBP9.46□□□□□ -0.9
UPF3B-201ENST00000276201 LYPD3O95274 346 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 RAB40ALP0C0E4 278 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 GABRA1P14867 456 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 CSNK2A2P19784 350 aaPredicted RBP9.46□□□□□ -0.9
UPF3B-201ENST00000276201 FXYD6P3P58550 94 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 FLI1Q01543 452 aaPredicted RBP9.46□□□□□ -0.9
UPF3B-201ENST00000276201 BTN1A1Q13410 526 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 GGTLC2Q14390 218 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 LASP1Q14847 261 aaKnown RBP9.46□□□□□ -0.9
UPF3B-201ENST00000276201 C11orf96Q7Z7L8 435 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 MEX3DQ86XN8 651 aaKnown RBP9.46□□□□□ -0.9
UPF3B-201ENST00000276201 VRK2Q86Y07 508 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 ZNF547Q8IVP9 402 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 MCATQ8IVS2 390 aaKnown RBP9.46□□□□□ -0.9
UPF3B-201ENST00000276201 LINC00518Q8N0U6 118 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 FANK1Q8TC84 345 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 THEM6Q8WUY1 208 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 RAB40AQ8WXH6 277 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 SMIM19Q96E16 107 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 ELMOD3Q96FG2 381 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 PRSS27Q9BQR3 290 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 YIPF4Q9BSR8 244 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 ACTRT3Q9BYD9 372 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 NRIP3Q9NQ35 241 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 OR6C2Q9NZP2 312 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 C5AR2Q9P296 337 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 SLC23A2Q9UGH3 650 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 PPIEQ9UNP9 301 aaKnown RBP9.46□□□□□ -0.9
UPF3B-201ENST00000276201 KCNK6Q9Y257 313 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 KCNK7Q9Y2U2 307 aa9.46□□□□□ -0.9
UPF3B-201ENST00000276201 A0A1W2PPV9 198 aa9.45□□□□□ -0.9
UPF3B-201ENST00000276201 TRAPPC13A5PLN9 417 aa9.45□□□□□ -0.9
UPF3B-201ENST00000276201 CDHR4A6H8M9 788 aa9.45□□□□□ -0.9
UPF3B-201ENST00000276201 LRIT2A6NDA9 550 aa9.45□□□□□ -0.9
UPF3B-201ENST00000276201 A8MUA0 341 aa9.45□□□□□ -0.9
UPF3B-201ENST00000276201 PRR23D1E9PI22 279 aaPredicted RBP9.45□□□□□ -0.9
UPF3B-201ENST00000276201 SUSD5O60279 629 aa9.45□□□□□ -0.9
UPF3B-201ENST00000276201 CREBL2O60519 120 aaPredicted RBP9.45□□□□□ -0.9
UPF3B-201ENST00000276201 RP2O75695 350 aa9.45□□□□□ -0.9
UPF3B-201ENST00000276201 NDUFB6O95139 128 aa9.45□□□□□ -0.9
UPF3B-201ENST00000276201 EML2O95834 649 aa9.45□□□□□ -0.9
UPF3B-201ENST00000276201 ALDOBP05062 364 aa9.45□□□□□ -0.9
UPF3B-201ENST00000276201 GP1BAP07359 652 aa9.45□□□□□ -0.9
UPF3B-201ENST00000276201 PRR23D2P0DMB1 279 aaPredicted RBP9.45□□□□□ -0.9
UPF3B-201ENST00000276201 MAZP56270 477 aaKnown RBP9.45□□□□□ -0.9
UPF3B-201ENST00000276201 SCAND1P57086 179 aa9.45□□□□□ -0.9
UPF3B-201ENST00000276201 SEC61A1P61619 476 aaKnown RBP9.45□□□□□ -0.9
UPF3B-201ENST00000276201 ACTA2P62736 377 aa9.45□□□□□ -0.9
UPF3B-201ENST00000276201 ACTG2P63267 376 aa9.45□□□□□ -0.9
UPF3B-201ENST00000276201 INSM1Q01101 510 aaPredicted RBP9.45□□□□□ -0.9
UPF3B-201ENST00000276201 CDK5R1Q15078 307 aa9.45□□□□□ -0.9
UPF3B-201ENST00000276201 C14orf28Q4W4Y0 310 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms