RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 HIST1H2ABP04908 130 aa13.12□□□□□ -0.31
TRIM23-202ENST00000274327 LIFP15018 202 aa13.12□□□□□ -0.31
TRIM23-202ENST00000274327 ADH6P28332 368 aa13.12□□□□□ -0.31
TRIM23-202ENST00000274327 NOS3P29474 1203 aa13.12□□□□□ -0.31
TRIM23-202ENST00000274327 CTXN1P60606 82 aa13.12□□□□□ -0.31
TRIM23-202ENST00000274327 ERVK-25P63136 954 aa13.12□□□□□ -0.31
TRIM23-202ENST00000274327 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.12□□□□□ -0.31
TRIM23-202ENST00000274327 AIMP2Q13155 320 aaKnown RBP13.12□□□□□ -0.31
TRIM23-202ENST00000274327 SGCBQ16585 318 aa13.12□□□□□ -0.31
TRIM23-202ENST00000274327 HIST3H2AQ7L7L0 130 aa13.12□□□□□ -0.31
TRIM23-202ENST00000274327 MDGA2Q7Z553 956 aa13.12□□□□□ -0.31
TRIM23-202ENST00000274327 OR52E2Q8NGJ4 325 aa13.12□□□□□ -0.31
TRIM23-202ENST00000274327 OR5J2Q8NH18 312 aa13.12□□□□□ -0.31
TRIM23-202ENST00000274327 SNRNP27Q8WVK2 155 aaKnown RBP13.12□□□□□ -0.31
TRIM23-202ENST00000274327 HIST1H2ACQ93077 130 aa13.12□□□□□ -0.31
TRIM23-202ENST00000274327 KISS1RQ969F8 398 aaPredicted RBP13.12□□□□□ -0.31
TRIM23-202ENST00000274327 FER1L6-AS2Q96M78 137 aa13.12□□□□□ -0.31
TRIM23-202ENST00000274327 POTEKPQ9BYX7 375 aa13.12□□□□□ -0.31
TRIM23-202ENST00000274327 NDEL1Q9GZM8 345 aa13.12□□□□□ -0.31
TRIM23-202ENST00000274327 TAS2R5Q9NYW4 299 aa13.12□□□□□ -0.31
TRIM23-202ENST00000274327 WARS2Q9UGM6 360 aaKnown RBP13.12□□□□□ -0.31
TRIM23-202ENST00000274327 LSM2Q9Y333 95 aaKnown RBP13.12□□□□□ -0.31
TRIM23-202ENST00000274327 TRIM3O75382 744 aaPredicted RBP13.11□□□□□ -0.31
TRIM23-202ENST00000274327 IL11P20809 199 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 GRPRP30550 384 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 OXA1LQ15070 435 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 ARMC4Q5T2S8 1044 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 NANOGP1Q8N7R0 232 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 SDR9C7Q8NEX9 313 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 OR4K13Q8NH42 304 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 MFSD8Q8NHS3 518 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 ZBTB8AQ96BR9 441 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 DDIT4LQ96D03 193 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 FUNDC2Q9BWH2 189 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 KLHL1Q9NR64 748 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 CLEC2DQ9UHP7 191 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 CNOT1A5YKK6 2376 aaKnown RBP13.11□□□□□ -0.31
TRIM23-202ENST00000274327 J3QRE1 110 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 ATP6V1G1O75348 118 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 P04436 131 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 PAICSP22234 425 aaKnown RBP13.11□□□□□ -0.31
TRIM23-202ENST00000274327 TGFBR2P37173 567 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 EIF1P41567 113 aaKnown RBP13.11□□□□□ -0.31
TRIM23-202ENST00000274327 CAMK2BQ13554 666 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 TIGD6Q17RP2 521 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 TIGD3Q6B0B8 471 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 SLC16A12Q6ZSM3 486 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 CYB561A3Q8NBI2 242 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 FAM98AQ8NCA5 519 aaKnown RBP13.11□□□□□ -0.31
TRIM23-202ENST00000274327 NPEPL1Q8NDH3 523 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 PROKR2Q8NFJ6 384 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 OR1J4Q8NGS1 313 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 SLC25A36Q96CQ1 311 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 RASD2Q96D21 266 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 ARL5BQ96KC2 179 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 Q96M85 177 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 OR5M11Q96RB7 305 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 JAM3Q9BX67 310 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 SERINC1Q9NRX5 453 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 SACM1LQ9NTJ5 587 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 ANKRD10Q9NXR5 420 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 MRPL39Q9NYK5 338 aaKnown RBP13.11□□□□□ -0.31
TRIM23-202ENST00000274327 STMN3Q9NZ72 180 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 SEC14L4Q9UDX3 406 aa13.11□□□□□ -0.31
TRIM23-202ENST00000274327 EXOSC1Q9Y3B2 195 aaKnown RBP13.11□□□□□ -0.31
TRIM23-202ENST00000274327 MED13Q9UHV7 2174 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 FAM186AA6NE01 2351 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 ZFHX2Q9C0A1 2572 aaPredicted RBP13.1□□□□□ -0.31
TRIM23-202ENST00000274327 TEX13CA0A0J9YWL9 993 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 SLC22A31A6NKX4 558 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 PLPP3O14495 311 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 APOL3O95236 402 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 IGHA1P01876 353 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 F13BP05160 661 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 SDHAP31040 664 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 CYB561P49447 251 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 DSCR4P56555 118 aaPredicted RBP13.1□□□□□ -0.31
TRIM23-202ENST00000274327 DOC2BQ14184 412 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 MFSD13AQ14CX5 517 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 RTP5Q14D33 572 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 DGUOKQ16854 277 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 TRIM16LQ309B1 348 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 EMC4Q5J8M3 183 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 PAQR6Q6TCH4 344 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 PSD4Q8NDX1 1056 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 OR4F15Q8NGB8 312 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 OTULINQ96BN8 352 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 DNAJA3Q96EY1 480 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 TSPAN32Q96QS1 320 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 TEAD3Q99594 435 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 MND1Q9BWT6 205 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 ASPNQ9BXN1 380 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 NMNAT2Q9BZQ4 307 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 AKIP1Q9NQ31 210 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 HAO2Q9NYQ3 351 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 TEKT2Q9UIF3 430 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 CORINQ9Y5Q5 1042 aa13.1□□□□□ -0.31
TRIM23-202ENST00000274327 SPIN1Q9Y657 262 aaPredicted RBP13.1□□□□□ -0.31
TRIM23-202ENST00000274327 G3V3Y1 287 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 CLUP10909 449 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms