RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 BTAF1O14981 1849 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 NSA2O95478 260 aaKnown RBP16.7■□□□□ 0.26
COL5A3-201ENST00000264828 PTAFRP25105 342 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 CTBSQ01459 385 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 SLC10A1Q14973 349 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 SIAH3Q8IW03 269 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 SLC38A5Q8WUX1 472 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 SELENOIQ9C0D9 397 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 CD207Q9UJ71 328 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 STMND1H3BQB6 276 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 RPA2P15927 270 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 APEX1P27695 318 aaKnown RBP16.7■□□□□ 0.26
COL5A3-201ENST00000264828 CDKN3Q16667 212 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 HNRNPA1L2Q32P51 320 aaKnown RBP16.7■□□□□ 0.26
COL5A3-201ENST00000264828 SLC36A2Q495M3 483 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 SLC16A14Q7RTX9 510 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 SPRED1Q7Z699 444 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 MS4A4AQ96JQ5 239 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 OR5M11Q96RB7 305 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 MAST2Q6P0Q8 1798 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 TACR1P25103 407 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 GPLD1P80108 840 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 HTR4Q13639 388 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 FCN2Q15485 313 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 LILRA2Q8N149 483 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 CLEC1AQ8NC01 280 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 ANKRD9Q96BM1 317 aaPredicted RBP16.7■□□□□ 0.26
COL5A3-201ENST00000264828 ALG12Q9BV10 488 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 HRASLSQ9HDD0 168 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 MBLAC1A4D2B0 266 aaPredicted RBP16.7■□□□□ 0.26
COL5A3-201ENST00000264828 RAB27BO00194 218 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 TOR1AO14656 332 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 ATXN1LP0C7T5 689 aaKnown RBP16.7■□□□□ 0.26
COL5A3-201ENST00000264828 NDUFA6P56556 154 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 TLE1Q04724 770 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 COX20Q5RI15 118 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 HBMQ6B0K9 141 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 ABHD4Q8TB40 342 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 NMNAT3Q96T66 252 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 INSM2Q96T92 566 aaPredicted RBP16.7■□□□□ 0.26
COL5A3-201ENST00000264828 CDCA3Q99618 268 aaPredicted RBP16.7■□□□□ 0.26
COL5A3-201ENST00000264828 C11orf54Q9H0W9 315 aaPredicted RBP16.7■□□□□ 0.26
COL5A3-201ENST00000264828 NIPAL2Q9H841 368 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 NTN4Q9HB63 628 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 MRPS28Q9Y2Q9 187 aaKnown RBP16.7■□□□□ 0.26
COL5A3-201ENST00000264828 AQP9O43315 295 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 CLEC2LP0C7M8 214 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 DBPQ10586 325 aaPredicted RBP16.7■□□□□ 0.26
COL5A3-201ENST00000264828 ZNF684Q5T5D7 378 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.7■□□□□ 0.26
COL5A3-201ENST00000264828 RETREG3Q86VR2 466 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 LINC00346Q8IVM7 164 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 CMIPQ8IY22 773 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 MMP21Q8N119 569 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 SLC30A7Q8NEW0 376 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 PXT1Q8NFP0 134 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 ZBED3Q96IU2 234 aaPredicted RBP16.7■□□□□ 0.26
COL5A3-201ENST00000264828 TMEM59Q9BXS4 323 aa16.7■□□□□ 0.26
COL5A3-201ENST00000264828 P2RY10O00398 339 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 EIF2DP41214 584 aaKnown RBP16.69■□□□□ 0.26
COL5A3-201ENST00000264828 OR4Q3Q8NH05 313 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 TMEM255BQ8WV15 326 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 ULBP3Q9BZM4 244 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 ANKRD19PQ9H560 264 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 LIN7BQ9HAP6 207 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 FAM212BQ9NTI7 297 aaPredicted RBP16.69■□□□□ 0.26
COL5A3-201ENST00000264828 GPR75O95800 540 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 TACR3P29371 465 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 AKR1C1Q04828 323 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 UPRTQ96BW1 309 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 C20orf85Q9H1P6 137 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 TMEM212A6NML5 194 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 PSMB1P20618 241 aaKnown RBP16.69■□□□□ 0.26
COL5A3-201ENST00000264828 NPBWR1P48145 328 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 TMEM176BQ3YBM2 270 aaPredicted RBP16.69■□□□□ 0.26
COL5A3-201ENST00000264828 CCDC71Q8IV32 467 aaPredicted RBP16.69■□□□□ 0.26
COL5A3-201ENST00000264828 OR52I1Q8NGK6 324 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 PURGQ9UJV8 347 aaKnown RBP16.69■□□□□ 0.26
COL5A3-201ENST00000264828 SLC22A7Q9Y694 548 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 C17orf112F2Z3M2 114 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 KCNK2O95069 426 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 FOLR1P15328 257 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 ADRA1AP35348 466 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 TM4SF4P48230 202 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 SRP9P49458 86 aaKnown RBP16.69■□□□□ 0.26
COL5A3-201ENST00000264828 SIRPAP78324 504 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 TESK1Q15569 626 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 MARCH8Q5T0T0 291 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 NPSR1Q6W5P4 371 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 TCEAL8Q8IYN2 117 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 LSMEM2Q8N112 164 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 TPPP3Q9BW30 176 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 PAPD4Q6PIY7 484 aaKnown RBP16.69■□□□□ 0.26
COL5A3-201ENST00000264828 MFSD9Q8NBP5 474 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 OR56B1Q8NGI3 324 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 ISG20Q96AZ6 181 aaKnown RBP16.69■□□□□ 0.26
COL5A3-201ENST00000264828 ZMAT3Q9HA38 289 aaKnown RBP16.69■□□□□ 0.26
COL5A3-201ENST00000264828 SNX11Q9Y5W9 270 aa16.69■□□□□ 0.26
COL5A3-201ENST00000264828 PCBD1P61457 104 aa16.68■□□□□ 0.26
COL5A3-201ENST00000264828 MZT1Q08AG7 82 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms