RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 SNRPBP14678 240 aaKnown RBP12.92□□□□□ -0.34
CDH3-201ENST00000264012 JUNBP17275 347 aaPredicted RBP12.92□□□□□ -0.34
CDH3-201ENST00000264012 SHC1P29353 583 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 SLC35A1P78382 337 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 KCNJ8Q15842 424 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 NOXA1Q86UR1 476 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 LAX1Q8IWV1 398 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 RCBTB1Q8NDN9 531 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 PFN4Q8NHR9 129 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 SNAPC3Q92966 411 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 TMEM106AQ96A25 262 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 RRNAD1Q96FB5 475 aaKnown RBP12.92□□□□□ -0.34
CDH3-201ENST00000264012 OR51B6Q9H340 312 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 SHROOM3Q8TF72 1996 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 TCRBV5S2A0A599 114 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 SLC43A1O75387 559 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 CNOT4O95628 575 aaKnown RBP12.91□□□□□ -0.34
CDH3-201ENST00000264012 IFNA5P01569 189 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 MT-ND4P03905 459 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 THBS1P07996 1170 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 MLC1Q15049 377 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 HBMQ6B0K9 141 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 KIF18BQ86Y91 864 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 ABHD4Q8TB40 342 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 PIGBOS1A0A0B4J2F0 54 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 FCMRO60667 390 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 NSA2O95478 260 aaKnown RBP12.91□□□□□ -0.34
CDH3-201ENST00000264012 IFNGR1P15260 489 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 BIDP55957 195 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 CXADRP78310 365 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 C9orf135Q5VTT2 229 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 CLDN22Q8N7P3 220 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 FRMD1Q8N878 549 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 SLC2A12Q8TD20 617 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 CCDC74AQ96AQ1 378 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 GIMAP5Q96F15 307 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 WIF1Q9Y5W5 379 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 COL5A3P25940 1745 aaPredicted RBP12.91□□□□□ -0.34
CDH3-201ENST00000264012 GABRR1P24046 479 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 HLA-DMAP28067 261 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 ADH6P28332 368 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 CLDN12P56749 244 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 FGFBP1Q14512 234 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 AAED1Q7RTV5 226 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 IL17RDQ8NFM7 739 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 DEDD2Q8WXF8 326 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 Q96M85 177 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 UTP23Q9BRU9 249 aaKnown RBP12.91□□□□□ -0.34
CDH3-201ENST00000264012 SPNS1Q9H2V7 528 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 OR2A25A4D2G3 310 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 H7C2Y5 167 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 FZD7O75084 574 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 GLULP15104 373 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 GCH1P30793 250 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 HACD4Q5VWC8 232 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 SLC16A14Q7RTX9 510 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 LRRC18Q8N456 261 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 CNEP1R1Q8N9A8 125 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 ZNF454Q8N9F8 522 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 CD300LFQ8TDQ1 290 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 TM9SF4Q92544 642 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 RASD2Q96D21 266 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 ALG14Q96F25 216 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 MBOAT4Q96T53 435 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 NRIP3Q9NQ35 241 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 ZNF226Q9NYT6 803 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 NDRG4Q9ULP0 352 aaKnown RBP12.91□□□□□ -0.34
CDH3-201ENST00000264012 SLC17A4Q9Y2C5 497 aa12.91□□□□□ -0.34
CDH3-201ENST00000264012 ARPC5O15511 151 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 PRPH2P23942 346 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 SLC35A2P78381 396 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 CYCSP99999 105 aaKnown RBP12.9□□□□□ -0.34
CDH3-201ENST00000264012 Q499Y3 187 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 SYT14P1Q58G82 188 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 PTOV1Q86YD1 416 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 SLC43A2Q8N370 569 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 CCDC71LQ8N9Z2 235 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 OR52N1Q8NH53 320 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 SORCS2Q96PQ0 1159 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 PRRT1Q99946 306 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 RCE1Q9Y256 329 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 MCM3APO60318 1980 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 PAHP00439 452 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 CD22P20273 847 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 EIF1P41567 113 aaKnown RBP12.9□□□□□ -0.34
CDH3-201ENST00000264012 CAPZBP47756 277 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 HTRA4P83105 476 aaPredicted RBP12.9□□□□□ -0.34
CDH3-201ENST00000264012 MEF2DQ14814 521 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 UBE2UQ5VVX9 321 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 METAP1DQ6UB28 335 aaPredicted RBP12.9□□□□□ -0.34
CDH3-201ENST00000264012 OR13C9Q8NGT0 318 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 ELMOD3Q96FG2 381 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 KLHL13Q9P2N7 655 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 PPIL1Q9Y3C6 166 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 B3GALT1Q9Y5Z6 326 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 ADAMTSL1Q8N6G6 1762 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 C2orf72A6NCS6 295 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 F5H5P2 479 aa12.9□□□□□ -0.34
CDH3-201ENST00000264012 DVL2O14641 736 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms