RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 FAM171A2A8MVW0 826 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 E7EQL1 145 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 M0R082 166 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 AIM2O14862 343 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 TROVE2P10155 538 aaKnown RBP eCLIP14.08□□□□□ -0.16
USE1-201ENST00000263897 ZNF43P17038 809 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 CDH2P19022 906 aaPredicted RBP14.08□□□□□ -0.16
USE1-201ENST00000263897 GRPRP30550 384 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 GZMMP51124 257 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 ARFIP2P53365 341 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 CDH11P55287 796 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 CLDN17P56750 224 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 NCALDP61601 193 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 SLC25A3Q00325 362 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 LGALS3BPQ08380 585 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 CYLC2Q14093 348 aaPredicted RBP14.08□□□□□ -0.16
USE1-201ENST00000263897 NANOGP8Q6NSW7 305 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 SLC22A25Q6T423 547 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 DTX2Q86UW9 622 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 RANBP3LQ86VV4 465 aaPredicted RBP14.08□□□□□ -0.16
USE1-201ENST00000263897 SLC30A8Q8IWU4 369 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 DEPDC4Q8N2C3 294 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 OR6S1Q8NH40 331 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 OR10A6Q8NH74 314 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 ZNF417Q8TAU3 575 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 RNF217Q8TC41 542 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 POM121Q96HA1 1249 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 ZNF587Q96SQ5 575 aaPredicted RBP14.08□□□□□ -0.16
USE1-201ENST00000263897 TRAF4Q9BUZ4 470 aaPredicted RBP14.08□□□□□ -0.16
USE1-201ENST00000263897 LINC00470Q9BZP3 86 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 NANOGQ9H9S0 305 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 FGFR1OP2Q9NVK5 253 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 FAIMQ9NVQ4 179 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 B3GAT1Q9P2W7 334 aa14.08□□□□□ -0.16
USE1-201ENST00000263897 ZNF587BE7ETH6 402 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 MS4A18H0YCH9 400 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 FMO6PO60774 539 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 UPK3AO75631 287 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 ZNF432O94892 652 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 LY6G6DO95868 133 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 WNT11O96014 354 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 HOXB4P17483 251 aaPredicted RBP14.07□□□□□ -0.16
USE1-201ENST00000263897 CDKN1AP38936 164 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 CDH12P55289 794 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 LTBQ06643 244 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 SPOCK1Q08629 439 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 MFSD13AQ14CX5 517 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 NRF1Q16656 503 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 MS4A18Q3C1V0 323 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 HIKESHIQ53FT3 197 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 SWT1Q5T5J6 900 aaKnown RBP14.07□□□□□ -0.16
USE1-201ENST00000263897 Q71RC1 249 aaPredicted RBP14.07□□□□□ -0.16
USE1-201ENST00000263897 LINGO2Q7L985 606 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 PATL1Q86TB9 770 aaKnown RBP14.07□□□□□ -0.16
USE1-201ENST00000263897 GPR32P1Q8NGA4 272 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 BCL2L2Q92843 193 aaPredicted RBP14.07□□□□□ -0.16
USE1-201ENST00000263897 SLC41A3Q96GZ6 507 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 EPYCQ99645 322 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 MCHR1Q99705 422 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 ARHGDIGQ99819 225 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 DHRS9Q9BPW9 319 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 ALG2Q9H553 416 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 MRGBPQ9NV56 204 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 KLHL14Q9P2G3 628 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 RCE1Q9Y256 329 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 ZANQ9Y493 2812 aa14.07□□□□□ -0.16
USE1-201ENST00000263897 SMAD7O15105 426 aaKnown RBP14.06□□□□□ -0.16
USE1-201ENST00000263897 BGLAPP02818 100 aa14.06□□□□□ -0.16
USE1-201ENST00000263897 OPN1SWP03999 348 aa14.06□□□□□ -0.16
USE1-201ENST00000263897 PTNP21246 168 aa14.06□□□□□ -0.16
USE1-201ENST00000263897 CBLP22681 906 aa14.06□□□□□ -0.16
USE1-201ENST00000263897 TTKP33981 857 aa14.06□□□□□ -0.16
USE1-201ENST00000263897 PCGF2P35227 344 aa14.06□□□□□ -0.16
USE1-201ENST00000263897 KLF10Q13118 480 aa14.06□□□□□ -0.16
USE1-201ENST00000263897 C1DQ13901 141 aaKnown RBP14.06□□□□□ -0.16
USE1-201ENST00000263897 ETFDHQ16134 617 aa14.06□□□□□ -0.16
USE1-201ENST00000263897 VMACQ2NL98 169 aa14.06□□□□□ -0.16
USE1-201ENST00000263897 TRMT5Q32P41 509 aaKnown RBP14.06□□□□□ -0.16
USE1-201ENST00000263897 TBRG1Q3YBR2 411 aa14.06□□□□□ -0.16
USE1-201ENST00000263897 INTS11Q5TA45 600 aaKnown RBP14.06□□□□□ -0.16
USE1-201ENST00000263897 AGAP6Q5VW22 663 aa14.06□□□□□ -0.16
USE1-201ENST00000263897 CGB2Q6NT52 195 aa14.06□□□□□ -0.16
USE1-201ENST00000263897 ZNF613Q6PF04 617 aa14.06□□□□□ -0.16
USE1-201ENST00000263897 LINC00114Q6XXX2 140 aa14.06□□□□□ -0.16
USE1-201ENST00000263897 ADPRHL1Q8NDY3 354 aa14.06□□□□□ -0.16
USE1-201ENST00000263897 ANKK1Q8NFD2 765 aa14.06□□□□□ -0.16
USE1-201ENST00000263897 OR6T1Q8NGN1 323 aa14.06□□□□□ -0.16
USE1-201ENST00000263897 OR1K1Q8NGR3 316 aa14.06□□□□□ -0.16
USE1-201ENST00000263897 SH3GL1Q99961 368 aa14.06□□□□□ -0.16
USE1-201ENST00000263897 TMEM43Q9BTV4 400 aa14.06□□□□□ -0.16
USE1-201ENST00000263897 OBP2BQ9NPH6 170 aa14.06□□□□□ -0.16
USE1-201ENST00000263897 SAR1AQ9NR31 198 aa14.06□□□□□ -0.16
USE1-201ENST00000263897 POU2F3Q9UKI9 436 aa14.06□□□□□ -0.16
USE1-201ENST00000263897 CORINQ9Y5Q5 1042 aa14.06□□□□□ -0.16
USE1-201ENST00000263897 RPL36A-HNRNPH2H7BZ11 118 aa14.05□□□□□ -0.16
USE1-201ENST00000263897 M0R3H8 397 aa14.05□□□□□ -0.16
USE1-201ENST00000263897 SLC43A1O75387 559 aa14.05□□□□□ -0.16
USE1-201ENST00000263897 NPPAP01160 153 aa14.05□□□□□ -0.16
USE1-201ENST00000263897 HEXAP06865 529 aa14.05□□□□□ -0.16
USE1-201ENST00000263897 VIMP08670 466 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms