RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 PDZD11Q5EBL8 140 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 BLOC1S3Q6QNY0 202 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 SSX9Q7RTT3 188 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 PINX1Q96BK5 328 aaKnown RBP10.61□□□□□ -0.71
PTPN4-201ENST00000263708 C20orf24Q9BUV8 137 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 EPHX3Q9H6B9 360 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 ICE1Q9Y2F5 2266 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 PLSCR1O15162 318 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 RGNQ15493 299 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 MAMDC4Q6UXC1 1216 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 APOOQ9BUR5 198 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 PEAK1Q9H792 1746 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 LOC285095A0A1B0GVY8 99 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 CDHR4A6H8M9 788 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 ZNF813Q6ZN06 617 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 FGF3P11487 239 aaPredicted RBP10.6□□□□□ -0.71
PTPN4-201ENST00000263708 P2RX3P56373 397 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 OR5AS1Q8N127 324 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 SLC35E1Q96K37 410 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 SRRQ9GZT4 340 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 SCML1Q9UN30 329 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 ZNF593O00488 134 aaPredicted RBP10.6□□□□□ -0.71
PTPN4-201ENST00000263708 FAM189A1O60320 539 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 CXCL12P48061 93 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 ENTPD8Q5MY95 495 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 AAED1Q7RTV5 226 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 BHLHE23Q8NDY6 225 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 OR10J5Q8NHC4 309 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 STYXL1Q9Y6J8 313 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 LMTK2Q8IWU2 1503 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 SCRG1O75711 98 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 CD70P32970 193 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 NKAIN2Q5VXU1 208 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 ADGRG5Q8IZF4 528 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 OR56B1Q8NGI3 324 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 CCDC74AQ96AQ1 378 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 BTF3L4Q96K17 158 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 BIRC8Q96P09 236 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 ABHD6Q9BV23 337 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 DMRT3Q9NQL9 472 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 P4HTMQ9NXG6 502 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 EXO1Q9UQ84 846 aaKnown RBP10.6□□□□□ -0.71
PTPN4-201ENST00000263708 HSPE1-MOB4S4R3N1 261 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 TMEM265A0A087WTH1 108 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.6□□□□□ -0.71
PTPN4-201ENST00000263708 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.6□□□□□ -0.71
PTPN4-201ENST00000263708 SERTM1A2A2V5 107 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 J3QR89 54 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 RTL8BQ17RB0 113 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 OR7G3Q8NG95 312 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 C1orf198Q9H425 327 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 AIG1Q9NVV5 245 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 ANKRD10Q9NXR5 420 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 RFXAPO00287 272 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 POU2F2P09086 479 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 AHRP35869 848 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 TUSC1Q2TAM9 212 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 SLC35D2Q76EJ3 337 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 TUSC5Q8IXB3 177 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 TIMM29Q9BSF4 260 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 SLCO3A1Q9UIG8 710 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 AJAP1Q9UKB5 411 aaPredicted RBP10.6□□□□□ -0.71
PTPN4-201ENST00000263708 ADAMTS6Q9UKP5 1117 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 ZCWPW2A0A1B0GU75 182 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 OR1Q1Q15612 314 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 SLC7A5P1Q8MH63 180 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 ATP23Q9Y6H3 246 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 PCGF2P35227 344 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 HBMQ6B0K9 141 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 UTP4Q969X6 686 aaKnown RBP10.6□□□□□ -0.71
PTPN4-201ENST00000263708 ENPP5Q9UJA9 477 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 PIGLQ9Y2B2 252 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 ENPP4Q9Y6X5 453 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 A3GALT2U3KPV4 340 aa10.6□□□□□ -0.71
PTPN4-201ENST00000263708 TMEM82A0PJX8 343 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 BLVRBP30043 206 aaPredicted RBP10.59□□□□□ -0.71
PTPN4-201ENST00000263708 MMP12P39900 470 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 CDC34P49427 236 aaPredicted RBP10.59□□□□□ -0.71
PTPN4-201ENST00000263708 SELPLGQ14242 412 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 DLK2Q6UY11 383 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 ARRDC3Q96B67 414 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 LANCL2Q9NS86 450 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 KLF11O14901 512 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 CYTIPO60759 359 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 STC2O76061 302 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 DCTP40126 519 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 OR8G1Q15617 311 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 C6orf89Q6UWU4 347 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 TMEM25Q86YD3 366 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 CISD2Q8N5K1 135 aaKnown RBP10.59□□□□□ -0.71
PTPN4-201ENST00000263708 WDR31Q8NA23 367 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 CMTM3Q96MX0 182 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 WDR83Q9BRX9 315 aaKnown RBP10.59□□□□□ -0.71
PTPN4-201ENST00000263708 TMPRSS5Q9H3S3 457 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 SLC22A7Q9Y694 548 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 IGLV3-22A0A075B6J6 115 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 TPOP07202 933 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 HMGCLP35914 325 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 OR1D4P47884 311 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 MTMR14Q8NCE2 650 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms